Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
GABREP78334 AC092447.7-201ENST00000422212 1621 ntBASIC5.7□□□□□ -1.5
GABREP78334 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.7□□□□□ -1.5
GABREP78334 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 MTND4P16-201ENST00000466108 1367 ntBASIC5.7□□□□□ -1.5
GABREP78334 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
GABREP78334 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 AC092079.1-201ENST00000558620 1985 ntBASIC5.7□□□□□ -1.5
GABREP78334 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 AC103591.2-201ENST00000265259 766 ntBASIC5.7□□□□□ -1.5
GABREP78334 Y_RNA.6-201ENST00000362350 114 ntBASIC5.7□□□□□ -1.5
GABREP78334 RNA5SP394-201ENST00000364216 119 ntBASIC5.7□□□□□ -1.5
GABREP78334 RNU6-657P-201ENST00000383904 107 ntBASIC5.7□□□□□ -1.5
GABREP78334 RNU6-444P-201ENST00000383988 108 ntBASIC5.7□□□□□ -1.5
GABREP78334 RNU6-1042P-201ENST00000384204 107 ntBASIC5.7□□□□□ -1.5
GABREP78334 Y_RNA.516-201ENST00000384541 124 ntBASIC5.7□□□□□ -1.5
GABREP78334 MTCYBP36-201ENST00000404146 440 ntBASIC5.7□□□□□ -1.5
GABREP78334 PRRC2CP1-201ENST00000404428 159 ntBASIC5.7□□□□□ -1.5
GABREP78334 SPTLC1P2-201ENST00000407089 121 ntBASIC5.7□□□□□ -1.5
GABREP78334 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.7□□□□□ -1.5
GABREP78334 FCF1P9-201ENST00000412546 282 ntBASIC5.7□□□□□ -1.5
GABREP78334 UBTFL3-201ENST00000418934 1024 ntBASIC5.7□□□□□ -1.5
GABREP78334 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.7□□□□□ -1.5
GABREP78334 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.7□□□□□ -1.5
GABREP78334 HSPD1P12-201ENST00000429127 1069 ntBASIC5.7□□□□□ -1.5
GABREP78334 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.7□□□□□ -1.5
GABREP78334 MTND1P28-201ENST00000435623 950 ntBASIC5.7□□□□□ -1.5
GABREP78334 FMO7P-201ENST00000436045 768 ntBASIC5.7□□□□□ -1.5
GABREP78334 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.7□□□□□ -1.5
GABREP78334 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 AC104763.1-201ENST00000475274 360 ntBASIC5.7□□□□□ -1.5
GABREP78334 UBTFL6-201ENST00000477929 1024 ntBASIC5.7□□□□□ -1.5
GABREP78334 KLRA1P-201ENST00000503499 986 ntBASIC5.7□□□□□ -1.5
GABREP78334 BNIP3P41-201ENST00000503774 571 ntBASIC5.7□□□□□ -1.5
GABREP78334 AC011352.1-201ENST00000512300 793 ntBASIC5.7□□□□□ -1.5
GABREP78334 AP005639.1-201ENST00000526939 192 ntBASIC5.7□□□□□ -1.5
GABREP78334 HMGN2P36-201ENST00000529541 409 ntBASIC5.7□□□□□ -1.5
GABREP78334 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.7□□□□□ -1.5
GABREP78334 AC073916.1-201ENST00000545095 130 ntBASIC5.7□□□□□ -1.5
GABREP78334 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.7□□□□□ -1.5
GABREP78334 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.7□□□□□ -1.5
GABREP78334 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.7□□□□□ -1.5
GABREP78334 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 RBM11P1-201ENST00000604951 799 ntBASIC5.7□□□□□ -1.5
GABREP78334 AC005084.1-201ENST00000605160 304 ntBASIC5.7□□□□□ -1.5
GABREP78334 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 AL160394.1-201ENST00000624765 724 ntBASIC5.7□□□□□ -1.5
GABREP78334 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.7□□□□□ -1.5
GABREP78334 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.7□□□□□ -1.5
GABREP78334 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.7□□□□□ -1.5
GABREP78334 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GABREP78334 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.7□□□□□ -1.5
GABREP78334 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GABREP78334 AL031985.3-201ENST00000565390 2449 ntBASIC5.69□□□□□ -1.5
GABREP78334 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.69□□□□□ -1.5
GABREP78334 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GABREP78334 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.69□□□□□ -1.5
GABREP78334 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.69□□□□□ -1.5
GABREP78334 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.69□□□□□ -1.5
GABREP78334 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
GABREP78334 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GABREP78334 C4BPAP1-201ENST00000415474 1893 ntBASIC5.69□□□□□ -1.5
GABREP78334 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.69□□□□□ -1.5
GABREP78334 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
GABREP78334 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.69□□□□□ -1.5
GABREP78334 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
GABREP78334 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GABREP78334 SNRPEP3-201ENST00000338402 276 ntBASIC5.69□□□□□ -1.5
GABREP78334 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.69□□□□□ -1.5
GABREP78334 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GABREP78334 OR10R3P-201ENST00000361688 942 ntBASIC5.69□□□□□ -1.5
GABREP78334 SNORA64.1-201ENST00000362600 132 ntBASIC5.69□□□□□ -1.5
GABREP78334 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
GABREP78334 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GABREP78334 RPL21P108-201ENST00000413857 481 ntBASIC5.69□□□□□ -1.5
GABREP78334 HMGB1P11-201ENST00000413899 637 ntBASIC5.69□□□□□ -1.5
GABREP78334 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GABREP78334 AC083875.1-201ENST00000419509 405 ntBASIC5.69□□□□□ -1.5
GABREP78334 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.69□□□□□ -1.5
GABREP78334 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
GABREP78334 AL389915.1-201ENST00000422463 466 ntBASIC5.69□□□□□ -1.5
GABREP78334 MTCYBP5-201ENST00000423752 1135 ntBASIC5.69□□□□□ -1.5
GABREP78334 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms