Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SETP20-201ENST00000457046 852 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AC079841.1-201ENST00000481228 950 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 RN7SL808P-201ENST00000496066 299 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AC104109.1-201ENST00000498563 436 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.1□□□□□ -1.91
CKS1BP61024 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.1□□□□□ -1.91
CKS1BP61024 IGHV3-76-201ENST00000522465 295 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.1□□□□□ -1.91
CKS1BP61024 AC063949.1-201ENST00000552900 865 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.1□□□□□ -1.91
CKS1BP61024 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.1□□□□□ -1.91
CKS1BP61024 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.1□□□□□ -1.91
CKS1BP61024 RN7SL802P-201ENST00000577858 299 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 MIR4691-201ENST00000583764 85 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.1□□□□□ -1.91
CKS1BP61024 MEMO1P5-201ENST00000604810 406 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AC012603.1-201ENST00000606424 528 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AL121612.2-201ENST00000612261 482 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AC008121.2-201ENST00000614647 523 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AL138721.1-201ENST00000616756 179 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AL591926.8-201ENST00000616876 211 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.1□□□□□ -1.91
CKS1BP61024 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.1□□□□□ -1.91
CKS1BP61024 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CKS1BP61024 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CKS1BP61024 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.1□□□□□ -1.91
CKS1BP61024 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CKS1BP61024 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CKS1BP61024 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CKS1BP61024 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CKS1BP61024 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CKS1BP61024 RN7SKP162-201ENST00000363605 345 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CKS1BP61024 RNU1-44P-201ENST00000384453 163 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 RAB5CP1-201ENST00000395972 580 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 AL035696.2-201ENST00000407941 709 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 RN7SKP267-201ENST00000410381 285 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.09□□□□□ -1.91
CKS1BP61024 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CKS1BP61024 RPL31P45-201ENST00000419532 356 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS1BP61024 AC002069.1-201ENST00000429649 1159 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.09□□□□□ -1.91
CKS1BP61024 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC3.09□□□□□ -1.91
CKS1BP61024 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS1BP61024 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.09□□□□□ -1.91
CKS1BP61024 AC079168.2-201ENST00000453977 416 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 RPS20P32-201ENST00000456044 356 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 RPS5P7-201ENST00000456664 608 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 AC005229.2-201ENST00000456995 399 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.09□□□□□ -1.91
CKS1BP61024 RPL7P51-201ENST00000490532 749 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 HIGD1AP14-201ENST00000507617 282 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CKS1BP61024 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.09□□□□□ -1.91
CKS1BP61024 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS1BP61024 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.09□□□□□ -1.91
CKS1BP61024 OR5D17P-201ENST00000531492 978 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.09□□□□□ -1.91
CKS1BP61024 AC025260.1-201ENST00000548858 430 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.09□□□□□ -1.91
CKS1BP61024 AC020978.7-201ENST00000575953 1187 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 MIR5699-201ENST00000578903 90 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS1BP61024 RPL7P50-201ENST00000600588 727 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.09□□□□□ -1.91
CKS1BP61024 AC020910.3-201ENST00000603701 874 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 AL627230.1-201ENST00000613077 211 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.09□□□□□ -1.91
CKS1BP61024 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.09□□□□□ -1.91
CKS1BP61024 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.09□□□□□ -1.91
CKS1BP61024 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.09□□□□□ -1.91
CKS1BP61024 AL442639.1-201ENST00000625030 1899 ntBASIC3.09□□□□□ -1.92
CKS1BP61024 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.09□□□□□ -1.92
CKS1BP61024 NCLP2-201ENST00000416078 1462 ntBASIC3.09□□□□□ -1.92
CKS1BP61024 AP002001.2-201ENST00000529025 1469 ntBASIC3.09□□□□□ -1.92
CKS1BP61024 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKS1BP61024 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CKS1BP61024 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKS1BP61024 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CKS1BP61024 RNA5SP22-201ENST00000365393 109 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKS1BP61024 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKS1BP61024 CHMP1B2P-201ENST00000399581 597 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.08□□□□□ -1.92
CKS1BP61024 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.08□□□□□ -1.92
CKS1BP61024 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKS1BP61024 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.08□□□□□ -1.92
CKS1BP61024 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKS1BP61024 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.08□□□□□ -1.92
CKS1BP61024 AC073335.1-201ENST00000427776 363 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 RPL21P91-201ENST00000429231 479 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CKS1BP61024 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS1BP61024 RPL23AP52-201ENST00000439311 478 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 AL356535.1-201ENST00000440335 398 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 HMGN2P21-201ENST00000447764 270 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms