Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 HAUS1P1-201ENST00000505275 832 ntBASIC4.85□□□□□ -1.63
VCPP55072 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.85□□□□□ -1.63
VCPP55072 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.85□□□□□ -1.63
VCPP55072 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.85□□□□□ -1.63
VCPP55072 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.85□□□□□ -1.63
VCPP55072 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.85□□□□□ -1.63
VCPP55072 HMGB3P26-201ENST00000560051 582 ntBASIC4.85□□□□□ -1.63
VCPP55072 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.85□□□□□ -1.63
VCPP55072 AC017100.2-201ENST00000584628 355 ntBASIC4.85□□□□□ -1.63
VCPP55072 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.85□□□□□ -1.63
VCPP55072 AC233280.2-201ENST00000603917 1070 ntBASIC4.85□□□□□ -1.63
VCPP55072 RMST_5.1-201ENST00000618704 126 ntBASIC4.85□□□□□ -1.63
VCPP55072 MAPK10-303ENST00000641324 3959 ntBASIC4.85□□□□□ -1.63
VCPP55072 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VCPP55072 AC009313.2-201ENST00000417893 1941 ntBASIC4.85□□□□□ -1.63
VCPP55072 DDX18P4-201ENST00000511690 1966 ntBASIC4.85□□□□□ -1.63
VCPP55072 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.85□□□□□ -1.63
VCPP55072 LINC01109-201ENST00000603837 3081 ntBASIC4.85□□□□□ -1.63
VCPP55072 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
VCPP55072 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.84□□□□□ -1.63
VCPP55072 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.84□□□□□ -1.63
VCPP55072 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 SNORA71.3-201ENST00000362582 128 ntBASIC4.84□□□□□ -1.63
VCPP55072 MIR195-201ENST00000385194 87 ntBASIC4.84□□□□□ -1.63
VCPP55072 DHFRP5-201ENST00000406944 564 ntBASIC4.84□□□□□ -1.63
VCPP55072 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.84□□□□□ -1.63
VCPP55072 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 AC008280.1-201ENST00000418851 412 ntBASIC4.84□□□□□ -1.63
VCPP55072 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 RPS29P17-201ENST00000430795 166 ntBASIC4.84□□□□□ -1.63
VCPP55072 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.84□□□□□ -1.63
VCPP55072 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.84□□□□□ -1.63
VCPP55072 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VCPP55072 AC108463.1-201ENST00000450258 347 ntBASIC4.84□□□□□ -1.63
VCPP55072 C1DP3-201ENST00000455013 423 ntBASIC4.84□□□□□ -1.63
VCPP55072 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.84□□□□□ -1.63
VCPP55072 AC105137.1-201ENST00000484355 562 ntBASIC4.84□□□□□ -1.63
VCPP55072 RPL36AP41-201ENST00000493820 306 ntBASIC4.84□□□□□ -1.63
VCPP55072 AC113430.1-201ENST00000506872 718 ntBASIC4.84□□□□□ -1.63
VCPP55072 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.84□□□□□ -1.63
VCPP55072 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.84□□□□□ -1.63
VCPP55072 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 RPL21P7-201ENST00000557463 483 ntBASIC4.84□□□□□ -1.63
VCPP55072 RN7SL176P-201ENST00000580352 264 ntBASIC4.84□□□□□ -1.63
VCPP55072 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.84□□□□□ -1.63
VCPP55072 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.84□□□□□ -1.63
VCPP55072 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VCPP55072 OR51H2P-202ENST00000641424 3046 ntBASIC4.84□□□□□ -1.63
VCPP55072 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VCPP55072 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
VCPP55072 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.64
VCPP55072 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
VCPP55072 EOGT-210ENST00000615922 1931 ntBASIC4.84□□□□□ -1.64
VCPP55072 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VCPP55072 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.83□□□□□ -1.64
VCPP55072 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
VCPP55072 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VCPP55072 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VCPP55072 AL355852.1-201ENST00000454081 1771 ntBASIC4.83□□□□□ -1.64
VCPP55072 HSPD1P14-201ENST00000432666 1618 ntBASIC4.83□□□□□ -1.64
VCPP55072 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VCPP55072 MAPK10-286ENST00000641208 8747 ntBASIC4.83□□□□□ -1.64
VCPP55072 AP001002.1-201ENST00000625148 1513 ntBASIC4.83□□□□□ -1.64
VCPP55072 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.83□□□□□ -1.64
VCPP55072 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VCPP55072 SPRR2C-201ENST00000290702 219 ntBASIC4.83□□□□□ -1.64
VCPP55072 AL034374.1-201ENST00000406329 351 ntBASIC4.83□□□□□ -1.64
VCPP55072 RNU6-628P-201ENST00000410675 107 ntBASIC4.83□□□□□ -1.64
VCPP55072 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.83□□□□□ -1.64
VCPP55072 AL356387.2-201ENST00000422272 243 ntBASIC4.83□□□□□ -1.64
VCPP55072 RPL21P43-201ENST00000425440 472 ntBASIC4.83□□□□□ -1.64
VCPP55072 FTH1P16-201ENST00000435241 552 ntBASIC4.83□□□□□ -1.64
VCPP55072 CACYBPP1-201ENST00000438592 684 ntBASIC4.83□□□□□ -1.64
VCPP55072 ARL4AP3-201ENST00000441452 574 ntBASIC4.83□□□□□ -1.64
VCPP55072 GEMIN8P3-201ENST00000445417 720 ntBASIC4.83□□□□□ -1.64
VCPP55072 HSFY6P-201ENST00000445573 403 ntBASIC4.83□□□□□ -1.64
VCPP55072 EIF4A1P11-201ENST00000451239 222 ntBASIC4.83□□□□□ -1.64
VCPP55072 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.83□□□□□ -1.64
VCPP55072 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.83□□□□□ -1.64
VCPP55072 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
VCPP55072 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.83□□□□□ -1.64
VCPP55072 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.83□□□□□ -1.64
VCPP55072 CYCSP28-201ENST00000534284 321 ntBASIC4.83□□□□□ -1.64
VCPP55072 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.83□□□□□ -1.64
VCPP55072 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.83□□□□□ -1.64
VCPP55072 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.83□□□□□ -1.64
VCPP55072 AC016911.1-201ENST00000613297 452 ntBASIC4.83□□□□□ -1.64
VCPP55072 AL133243.1-201ENST00000614487 366 ntBASIC4.83□□□□□ -1.64
VCPP55072 LINC00901.1-201ENST00000617252 152 ntBASIC4.83□□□□□ -1.64
VCPP55072 AL590410.1-201ENST00000617925 333 ntBASIC4.83□□□□□ -1.64
VCPP55072 AP005019.3-201ENST00000620418 560 ntBASIC4.83□□□□□ -1.64
VCPP55072 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.83□□□□□ -1.64
VCPP55072 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms