Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LIMK2P53671 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIMK2P53671 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIMK2P53671 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIMK2P53671 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.52□□□□□ -1.69
LIMK2P53671 UBTFL3-201ENST00000418934 1024 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 HSFY1P1-201ENST00000423928 1178 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 RPEP3-201ENST00000425462 676 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.52□□□□□ -1.69
LIMK2P53671 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.52□□□□□ -1.69
LIMK2P53671 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LIMK2P53671 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 CASP3P1-201ENST00000446037 609 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 EIF2S2P2-201ENST00000447161 982 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.52□□□□□ -1.69
LIMK2P53671 Z95152.1-201ENST00000453556 656 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.52□□□□□ -1.69
LIMK2P53671 UBTFL6-201ENST00000477929 1024 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.52□□□□□ -1.69
LIMK2P53671 AC013356.1-201ENST00000489027 564 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.52□□□□□ -1.69
LIMK2P53671 AC008694.2-201ENST00000517591 306 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 PARP1P2-201ENST00000556806 195 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 AC021483.2-201ENST00000567415 758 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 AC136624.4-201ENST00000573044 370 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 RN7SL176P-201ENST00000580352 264 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 BPIFA4P-203ENST00000603168 689 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 AC233280.2-201ENST00000603917 1070 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 AL008729.2-201ENST00000606393 473 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 AL096803.3-201ENST00000609032 532 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 AC100847.1-201ENST00000611316 481 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 AC006338.2-201ENST00000616864 791 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 MIR7154-201ENST00000620673 73 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 AC055839.1-201ENST00000634467 498 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK2P53671 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.52□□□□□ -1.69
LIMK2P53671 AC024341.1-201ENST00000526444 1552 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 LINC00622-201ENST00000562811 1570 ntBASIC4.52□□□□□ -1.69
LIMK2P53671 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK2P53671 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.52□□□□□ -1.69
LIMK2P53671 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK2P53671 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK2P53671 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LIMK2P53671 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK2P53671 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK2P53671 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK2P53671 IGKV7-3-201ENST00000357453 298 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 RNA5SP447-201ENST00000363749 119 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 SNORA71.2-201ENST00000364941 134 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
LIMK2P53671 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK2P53671 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
LIMK2P53671 RNU6-225P-201ENST00000384613 103 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 AL078604.1-201ENST00000404609 466 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 UBE2V1P15-201ENST00000407776 448 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK2P53671 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK2P53671 SKP1P3-201ENST00000429280 487 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK2P53671 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK2P53671 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK2P53671 AC093663.2-201ENST00000484625 313 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 MTND4LP2-201ENST00000502312 285 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.51□□□□□ -1.69
LIMK2P53671 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK2P53671 RNU6-1308P-201ENST00000516817 103 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.51□□□□□ -1.69
LIMK2P53671 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK2P53671 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.51□□□□□ -1.69
LIMK2P53671 NOP56P3-201ENST00000549457 385 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.51□□□□□ -1.69
LIMK2P53671 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.51□□□□□ -1.69
LIMK2P53671 CKS1BP1-201ENST00000555221 240 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK2P53671 LINC00557-201ENST00000563184 1279 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 AC084783.1-201ENST00000565846 910 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.51□□□□□ -1.69
LIMK2P53671 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.51□□□□□ -1.69
LIMK2P53671 OR4H6P-202ENST00000603819 340 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 AL133338.2-201ENST00000604292 736 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 AL445423.1-201ENST00000609941 536 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 AC025016.1-201ENST00000616746 682 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 AL049536.1-201ENST00000625043 744 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.51□□□□□ -1.69
LIMK2P53671 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
LIMK2P53671 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.51□□□□□ -1.69
LIMK2P53671 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
LIMK2P53671 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
LIMK2P53671 AC108467.2-201ENST00000617640 1597 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK2P53671 CPHL1P-201ENST00000461341 3407 ntBASIC4.51□□□□□ -1.69
LIMK2P53671 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK2P53671 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK2P53671 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LIMK2P53671 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK2P53671 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK2P53671 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.5□□□□□ -1.69
LIMK2P53671 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms