Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.91□□□□□ -1.62
NUP98P52948 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP98P52948 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP98P52948 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP98P52948 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.91□□□□□ -1.62
NUP98P52948 AL354760.1-201ENST00000608357 643 ntBASIC4.91□□□□□ -1.62
NUP98P52948 AC012314.7-201ENST00000619693 93 ntBASIC4.91□□□□□ -1.62
NUP98P52948 AC079684.1-201ENST00000621405 437 ntBASIC4.91□□□□□ -1.62
NUP98P52948 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP98P52948 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP98P52948 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP98P52948 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NUP98P52948 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.91□□□□□ -1.62
NUP98P52948 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP98P52948 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP98P52948 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.9□□□□□ -1.62
NUP98P52948 RNA5SP51-201ENST00000364750 119 ntBASIC4.9□□□□□ -1.62
NUP98P52948 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.9□□□□□ -1.62
NUP98P52948 TCEA1P2-201ENST00000420496 906 ntBASIC4.9□□□□□ -1.62
NUP98P52948 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.9□□□□□ -1.62
NUP98P52948 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.9□□□□□ -1.62
NUP98P52948 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.9□□□□□ -1.62
NUP98P52948 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.9□□□□□ -1.62
NUP98P52948 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.9□□□□□ -1.62
NUP98P52948 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUP98P52948 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
NUP98P52948 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.9□□□□□ -1.62
NUP98P52948 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP98P52948 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP98P52948 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP98P52948 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP98P52948 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP98P52948 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP98P52948 RPL31P61-201ENST00000496160 376 ntBASIC4.9□□□□□ -1.63
NUP98P52948 RNU1-95P-201ENST00000516357 160 ntBASIC4.9□□□□□ -1.63
NUP98P52948 RNU1-128P-201ENST00000516704 160 ntBASIC4.9□□□□□ -1.63
NUP98P52948 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP98P52948 AC022695.1-201ENST00000522089 237 ntBASIC4.9□□□□□ -1.63
NUP98P52948 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP98P52948 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP98P52948 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP98P52948 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP98P52948 AC005344.1-201ENST00000613391 459 ntBASIC4.9□□□□□ -1.63
NUP98P52948 AC015908.5-201ENST00000623289 343 ntBASIC4.9□□□□□ -1.63
NUP98P52948 AL034408.1-202ENST00000636088 415 ntBASIC4.9□□□□□ -1.63
NUP98P52948 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
NUP98P52948 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP98P52948 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP98P52948 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP98P52948 AC233968.1-201ENST00000611212 1300 ntBASIC4.89□□□□□ -1.63
NUP98P52948 AL627171.1-201ENST00000618845 1308 ntBASIC4.89□□□□□ -1.63
NUP98P52948 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP98P52948 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
NUP98P52948 AC083837.1-201ENST00000565297 2994 ntBASIC4.89□□□□□ -1.63
NUP98P52948 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.89□□□□□ -1.63
NUP98P52948 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP98P52948 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP98P52948 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NUP98P52948 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP98P52948 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP98P52948 Z74696.2-201ENST00000436514 498 ntBASIC4.89□□□□□ -1.63
NUP98P52948 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.89□□□□□ -1.63
NUP98P52948 MIR5187-201ENST00000583479 76 ntBASIC4.89□□□□□ -1.63
NUP98P52948 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP98P52948 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
NUP98P52948 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
NUP98P52948 ZNF962P-201ENST00000443465 3140 ntBASIC4.89□□□□□ -1.63
NUP98P52948 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP98P52948 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUP98P52948 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP98P52948 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP98P52948 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP98P52948 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP98P52948 HMGB1P37-201ENST00000439613 609 ntBASIC4.88□□□□□ -1.63
NUP98P52948 AC006499.6-201ENST00000511169 607 ntBASIC4.88□□□□□ -1.63
NUP98P52948 SOD1P3-201ENST00000518682 454 ntBASIC4.88□□□□□ -1.63
NUP98P52948 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP98P52948 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.88□□□□□ -1.63
NUP98P52948 AC096577.2-201ENST00000611455 153 ntBASIC4.88□□□□□ -1.63
NUP98P52948 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP98P52948 AC024560.2-201ENST00000507981 1497 ntBASIC4.88□□□□□ -1.63
NUP98P52948 Z95331.1-201ENST00000623075 23112 ntBASIC4.88□□□□□ -1.63
NUP98P52948 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP98P52948 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
NUP98P52948 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUP98P52948 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP98P52948 VDAC2P1-201ENST00000399358 958 ntBASIC4.88□□□□□ -1.63
NUP98P52948 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP98P52948 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP98P52948 RPL23AP12-201ENST00000467573 473 ntBASIC4.88□□□□□ -1.63
NUP98P52948 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.88□□□□□ -1.63
NUP98P52948 AC093853.1-201ENST00000515689 483 ntBASIC4.88□□□□□ -1.63
NUP98P52948 RNU6-513P-201ENST00000516104 104 ntBASIC4.88□□□□□ -1.63
NUP98P52948 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP98P52948 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.88□□□□□ -1.63
NUP98P52948 CYCSP30-201ENST00000546447 172 ntBASIC4.88□□□□□ -1.63
NUP98P52948 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP98P52948 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.88□□□□□ -1.63
NUP98P52948 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP98P52948 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms