Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RPSAP41-201ENST00000439695 860 ntBASIC3.78□□□□□ -1.8
SRP9P49458 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.78□□□□□ -1.8
SRP9P49458 TPT1P13-201ENST00000449760 499 ntBASIC3.78□□□□□ -1.8
SRP9P49458 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.78□□□□□ -1.8
SRP9P49458 SNRPGP5-201ENST00000456003 220 ntBASIC3.78□□□□□ -1.8
SRP9P49458 RPL23AP71-201ENST00000470966 469 ntBASIC3.78□□□□□ -1.8
SRP9P49458 AC006463.2-201ENST00000473326 348 ntBASIC3.78□□□□□ -1.8
SRP9P49458 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.78□□□□□ -1.8
SRP9P49458 AC068305.1-201ENST00000497406 726 ntBASIC3.78□□□□□ -1.8
SRP9P49458 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.78□□□□□ -1.8
SRP9P49458 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.78□□□□□ -1.8
SRP9P49458 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.78□□□□□ -1.8
SRP9P49458 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.78□□□□□ -1.8
SRP9P49458 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.78□□□□□ -1.8
SRP9P49458 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.78□□□□□ -1.8
SRP9P49458 MIR4715-201ENST00000584117 79 ntBASIC3.78□□□□□ -1.8
SRP9P49458 AP001160.4-201ENST00000596971 382 ntBASIC3.78□□□□□ -1.8
SRP9P49458 AC005191.1-201ENST00000603950 358 ntBASIC3.78□□□□□ -1.8
SRP9P49458 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.78□□□□□ -1.8
SRP9P49458 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.78□□□□□ -1.8
SRP9P49458 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRP9P49458 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SRP9P49458 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRP9P49458 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SRP9P49458 AC025031.4-201ENST00000621248 3271 ntBASIC3.78□□□□□ -1.8
SRP9P49458 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.77□□□□□ -1.81
SRP9P49458 AP001486.2-201ENST00000561652 5113 ntBASIC3.77□□□□□ -1.81
SRP9P49458 AC009951.1-201ENST00000623674 2614 ntBASIC3.77□□□□□ -1.81
SRP9P49458 LINC02471-203ENST00000641941 4752 ntBASIC3.77□□□□□ -1.81
SRP9P49458 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SRP9P49458 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.77□□□□□ -1.81
SRP9P49458 PHKBP1-201ENST00000450951 1951 ntBASIC3.77□□□□□ -1.81
SRP9P49458 XIAPP3-201ENST00000312918 795 ntBASIC3.77□□□□□ -1.81
SRP9P49458 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SRP9P49458 MIR3065-201ENST00000390137 79 ntBASIC3.77□□□□□ -1.81
SRP9P49458 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SRP9P49458 RPS20P14-201ENST00000412545 360 ntBASIC3.77□□□□□ -1.81
SRP9P49458 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.77□□□□□ -1.81
SRP9P49458 RPL6P29-201ENST00000414863 865 ntBASIC3.77□□□□□ -1.81
SRP9P49458 RPL12P34-201ENST00000424532 479 ntBASIC3.77□□□□□ -1.81
SRP9P49458 RPEP3-201ENST00000425462 676 ntBASIC3.77□□□□□ -1.81
SRP9P49458 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.77□□□□□ -1.81
SRP9P49458 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.77□□□□□ -1.81
SRP9P49458 GSTA7P-201ENST00000438425 448 ntBASIC3.77□□□□□ -1.81
SRP9P49458 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SRP9P49458 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.77□□□□□ -1.81
SRP9P49458 CLIC4P1-201ENST00000453177 535 ntBASIC3.77□□□□□ -1.81
SRP9P49458 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.77□□□□□ -1.81
SRP9P49458 AC053481.1-201ENST00000467217 306 ntBASIC3.77□□□□□ -1.81
SRP9P49458 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SRP9P49458 TOMM20P2-201ENST00000540082 421 ntBASIC3.77□□□□□ -1.81
SRP9P49458 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.77□□□□□ -1.81
SRP9P49458 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.77□□□□□ -1.81
SRP9P49458 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SRP9P49458 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.77□□□□□ -1.81
SRP9P49458 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.77□□□□□ -1.81
SRP9P49458 AC090948.1-201ENST00000607464 549 ntBASIC3.77□□□□□ -1.81
SRP9P49458 MIR7703-201ENST00000620784 77 ntBASIC3.77□□□□□ -1.81
SRP9P49458 OR2L1P-202ENST00000641567 1023 ntBASIC3.77□□□□□ -1.81
SRP9P49458 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SRP9P49458 MFSD8-216ENST00000641147 4009 ntBASIC3.77□□□□□ -1.81
SRP9P49458 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.77□□□□□ -1.81
SRP9P49458 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SRP9P49458 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SRP9P49458 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SRP9P49458 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
SRP9P49458 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.77□□□□□ -1.81
SRP9P49458 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SRP9P49458 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SRP9P49458 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SRP9P49458 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.76□□□□□ -1.81
SRP9P49458 EXOC5P1-201ENST00000510543 1969 ntBASIC3.76□□□□□ -1.81
SRP9P49458 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SRP9P49458 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
SRP9P49458 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SRP9P49458 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
SRP9P49458 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.76□□□□□ -1.81
SRP9P49458 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.76□□□□□ -1.81
SRP9P49458 SNRPFP1-201ENST00000414761 252 ntBASIC3.76□□□□□ -1.81
SRP9P49458 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 ARAFP1-201ENST00000422172 605 ntBASIC3.76□□□□□ -1.81
SRP9P49458 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.76□□□□□ -1.81
SRP9P49458 RPL23AP89-201ENST00000439324 255 ntBASIC3.76□□□□□ -1.81
SRP9P49458 RPL7P32-201ENST00000457119 744 ntBASIC3.76□□□□□ -1.81
SRP9P49458 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.76□□□□□ -1.81
SRP9P49458 AC096741.1-201ENST00000472250 846 ntBASIC3.76□□□□□ -1.81
SRP9P49458 RN7SL810P-201ENST00000493031 276 ntBASIC3.76□□□□□ -1.81
SRP9P49458 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.76□□□□□ -1.81
SRP9P49458 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
SRP9P49458 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.76□□□□□ -1.81
SRP9P49458 IGLVIV-65-201ENST00000517313 360 ntBASIC3.76□□□□□ -1.81
SRP9P49458 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.76□□□□□ -1.81
SRP9P49458 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.76□□□□□ -1.81
SRP9P49458 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms