Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMAP28067 ZNF137P-201ENST00000456718 1920 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 RNA5SP191-201ENST00000362585 102 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 RNU6-1251P-201ENST00000364502 107 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 RNU4-4P-201ENST00000364588 130 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 MIR320B1-201ENST00000390209 79 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 SNORD65-201ENST00000391079 73 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMAP28067 AP000534.2-201ENST00000412729 568 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 RPL7P53-201ENST00000421245 739 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 NRBF2P3-201ENST00000432731 865 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 BMS1P19-201ENST00000433925 393 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 LYPLA1P1-201ENST00000434514 622 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 MTCYBP29-201ENST00000436327 1006 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 RPL23AP93-201ENST00000440847 484 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 RPS27AP17-201ENST00000463344 455 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 COPS8P2-201ENST00000473228 627 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC109462.1-201ENST00000491087 368 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC023050.1-201ENST00000498198 304 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC010680.4-201ENST00000605334 543 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC064801.1-201ENST00000612025 407 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC139769.3-201ENST00000618383 175 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 AL713922.2-201ENST00000619384 716 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 AL133370.2-201ENST00000619934 439 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC091905.4-201ENST00000623432 202 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 AC138393.1-206ENST00000540997 1886 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
HLA-DMAP28067 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMAP28067 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.72□□□□□ -1.81
HLA-DMAP28067 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMAP28067 MAPK10-263ENST00000641052 4307 ntBASIC3.71□□□□□ -1.81
HLA-DMAP28067 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.71□□□□□ -1.81
HLA-DMAP28067 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HLA-DMAP28067 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DMAP28067 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DMAP28067 AC021146.4-201ENST00000309229 279 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 SNORD66.1-201ENST00000391230 76 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 HMGN2P8-201ENST00000391458 268 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 CHMP1B2P-201ENST00000399581 597 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 AC087650.1-201ENST00000431445 468 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 UBE2V1P3-201ENST00000439651 417 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 SETP20-201ENST00000457046 852 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 RN7SL738P-201ENST00000470264 297 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 RPS27AP16-201ENST00000492222 470 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 RPL23AP72-201ENST00000492447 435 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 NIPA2P2-201ENST00000496376 1083 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 AC113398.2-201ENST00000507630 558 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 AC090568.1-201ENST00000509499 856 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 AC005000.1-201ENST00000536192 288 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 AL110118.1-201ENST00000553543 400 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 AGGF1P8-201ENST00000562979 1000 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 AC011477.5-201ENST00000586571 259 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 Z82195.1-201ENST00000604558 398 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 AP000864.1-201ENST00000609424 650 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 uc_338.9-201ENST00000617424 182 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 AP003497.2-201ENST00000624220 967 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 OR2L1P-202ENST00000641567 1023 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 LINC01808-202ENST00000641680 1116 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DMAP28067 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 LINC00561-201ENST00000565815 2738 ntBASIC3.71□□□□□ -1.82
HLA-DMAP28067 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DMAP28067 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DMAP28067 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
HLA-DMAP28067 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DMAP28067 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DMAP28067 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms