Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATF1P18846 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.69□□□□□ -1.82
ATF1P18846 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.69□□□□□ -1.82
ATF1P18846 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATF1P18846 CASC19-284ENST00000642142 1868 ntBASIC3.69□□□□□ -1.82
ATF1P18846 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATF1P18846 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
ATF1P18846 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATF1P18846 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.68□□□□□ -1.82
ATF1P18846 OR5P1P-201ENST00000299512 925 ntBASIC3.68□□□□□ -1.82
ATF1P18846 MIR331-201ENST00000362302 94 ntBASIC3.68□□□□□ -1.82
ATF1P18846 RNA5SP322-201ENST00000363617 119 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AL035419.1-201ENST00000397037 564 ntBASIC3.68□□□□□ -1.82
ATF1P18846 SNORA11F-201ENST00000408237 128 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.68□□□□□ -1.82
ATF1P18846 AC019050.1-201ENST00000418508 492 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AC006065.1-201ENST00000422539 802 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AC006455.6-201ENST00000426192 893 ntBASIC3.68□□□□□ -1.82
ATF1P18846 HMGB1P16-201ENST00000447155 540 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.68□□□□□ -1.82
ATF1P18846 AC083829.1-201ENST00000503756 657 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.68□□□□□ -1.82
ATF1P18846 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.68□□□□□ -1.82
ATF1P18846 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.68□□□□□ -1.82
ATF1P18846 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.68□□□□□ -1.82
ATF1P18846 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.68□□□□□ -1.82
ATF1P18846 AC090819.1-201ENST00000523800 1111 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATF1P18846 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.68□□□□□ -1.82
ATF1P18846 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATF1P18846 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.68□□□□□ -1.82
ATF1P18846 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.68□□□□□ -1.82
ATF1P18846 AC020914.4-201ENST00000597690 277 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AL139286.1-201ENST00000604465 483 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AL354984.3-201ENST00000604803 325 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AC012409.3-201ENST00000611343 981 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AC078899.5-201ENST00000612475 178 ntBASIC3.68□□□□□ -1.82
ATF1P18846 MIR6780A-201ENST00000615089 68 ntBASIC3.68□□□□□ -1.82
ATF1P18846 uc_338.13-201ENST00000618243 179 ntBASIC3.68□□□□□ -1.82
ATF1P18846 RMST_5.1-201ENST00000618704 126 ntBASIC3.68□□□□□ -1.82
ATF1P18846 AP006248.2-201ENST00000623309 592 ntBASIC3.68□□□□□ -1.82
ATF1P18846 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
ATF1P18846 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATF1P18846 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATF1P18846 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATF1P18846 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
ATF1P18846 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.68□□□□□ -1.82
ATF1P18846 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.68□□□□□ -1.82
ATF1P18846 AL031985.3-201ENST00000565390 2449 ntBASIC3.68□□□□□ -1.82
ATF1P18846 Z82217.1-201ENST00000625157 8149 ntBASIC3.68□□□□□ -1.82
ATF1P18846 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATF1P18846 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATF1P18846 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
ATF1P18846 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATF1P18846 AC027287.1-201ENST00000553115 1453 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.67□□□□□ -1.82
ATF1P18846 FAM35DP-201ENST00000323387 2712 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AC083899.2-201ENST00000423285 1376 ntBASIC3.67□□□□□ -1.82
ATF1P18846 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.67□□□□□ -1.82
ATF1P18846 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATF1P18846 RNU1-89P-201ENST00000384592 164 ntBASIC3.67□□□□□ -1.82
ATF1P18846 RNU6-146P-201ENST00000384602 108 ntBASIC3.67□□□□□ -1.82
ATF1P18846 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATF1P18846 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATF1P18846 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.67□□□□□ -1.82
ATF1P18846 MTCO1P54-201ENST00000430139 712 ntBASIC3.67□□□□□ -1.82
ATF1P18846 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.67□□□□□ -1.82
ATF1P18846 FTH1P16-201ENST00000435241 552 ntBASIC3.67□□□□□ -1.82
ATF1P18846 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATF1P18846 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.67□□□□□ -1.82
ATF1P18846 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.67□□□□□ -1.82
ATF1P18846 AL356535.1-201ENST00000440335 398 ntBASIC3.67□□□□□ -1.82
ATF1P18846 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATF1P18846 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.67□□□□□ -1.82
ATF1P18846 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.67□□□□□ -1.82
ATF1P18846 IFNWP4-201ENST00000453148 294 ntBASIC3.67□□□□□ -1.82
ATF1P18846 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.67□□□□□ -1.82
ATF1P18846 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATF1P18846 RN7SL826P-201ENST00000479724 288 ntBASIC3.67□□□□□ -1.82
ATF1P18846 RPL32P9-201ENST00000487963 407 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AC069499.1-201ENST00000489433 509 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
ATF1P18846 RPL31P61-201ENST00000496160 376 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.67□□□□□ -1.82
ATF1P18846 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.67□□□□□ -1.82
ATF1P18846 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.67□□□□□ -1.82
ATF1P18846 IGKV2-38-201ENST00000517443 247 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.67□□□□□ -1.82
ATF1P18846 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.67□□□□□ -1.82
ATF1P18846 AC063950.1-201ENST00000552036 308 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AC115989.2-201ENST00000578640 563 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AC113403.1-201ENST00000604910 193 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AC017076.1-201ENST00000607613 578 ntBASIC3.67□□□□□ -1.82
ATF1P18846 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.67□□□□□ -1.82
ATF1P18846 AC128687.2-201ENST00000609657 566 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AL161616.1-201ENST00000611867 286 ntBASIC3.67□□□□□ -1.82
ATF1P18846 AL049539.1-201ENST00000611964 459 ntBASIC3.67□□□□□ -1.82
ATF1P18846 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.67□□□□□ -1.82
ATF1P18846 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.67□□□□□ -1.82
ATF1P18846 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms