Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC2.44□□□□□ -2.02
APOBP04114 HIGD1AP18-201ENST00000520730 278 ntBASIC2.44□□□□□ -2.02
APOBP04114 AC138907.10-201ENST00000623708 983 ntBASIC2.44□□□□□ -2.02
APOBP04114 MAPK10-253ENST00000641010 4072 ntBASIC2.44□□□□□ -2.02
APOBP04114 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
APOBP04114 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
APOBP04114 AL356274.2-201ENST00000624379 3752 ntBASIC2.44□□□□□ -2.02
APOBP04114 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
APOBP04114 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC2.44□□□□□ -2.02
APOBP04114 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC2.44□□□□□ -2.02
APOBP04114 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC2.44□□□□□ -2.02
APOBP04114 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 BMS1P3-201ENST00000372011 932 ntBASIC2.44□□□□□ -2.02
APOBP04114 RNA5SP120-201ENST00000410900 112 ntBASIC2.44□□□□□ -2.02
APOBP04114 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.44□□□□□ -2.02
APOBP04114 AL161631.1-201ENST00000417933 486 ntBASIC2.44□□□□□ -2.02
APOBP04114 RPL29P14-201ENST00000495837 428 ntBASIC2.44□□□□□ -2.02
APOBP04114 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.44□□□□□ -2.02
APOBP04114 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.44□□□□□ -2.02
APOBP04114 RERGL-202ENST00000536890 367 ntTSL 3 BASIC2.44□□□□□ -2.02
APOBP04114 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.44□□□□□ -2.02
APOBP04114 AC007599.1-201ENST00000568688 1174 ntBASIC2.44□□□□□ -2.02
APOBP04114 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 THAP12P5-201ENST00000405864 2275 ntBASIC2.43□□□□□ -2.02
APOBP04114 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 AL079305.1-201ENST00000623159 3008 ntBASIC2.43□□□□□ -2.02
APOBP04114 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 HNRNPA1P54-201ENST00000411857 9714 ntBASIC2.43□□□□□ -2.02
APOBP04114 SNORA48.5-201ENST00000391143 135 ntBASIC2.43□□□□□ -2.02
APOBP04114 AC097713.2-201ENST00000430199 356 ntBASIC2.43□□□□□ -2.02
APOBP04114 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.43□□□□□ -2.02
APOBP04114 RSL24D1P3-201ENST00000449255 495 ntBASIC2.43□□□□□ -2.02
APOBP04114 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC2.43□□□□□ -2.02
APOBP04114 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC2.43□□□□□ -2.02
APOBP04114 AC119674.1-207ENST00000641355 633 ntBASIC2.43□□□□□ -2.02
APOBP04114 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 AL035425.3-201ENST00000564206 4996 ntBASIC2.43□□□□□ -2.02
APOBP04114 AC092111.2-201ENST00000611627 1414 ntBASIC2.43□□□□□ -2.02
APOBP04114 AC233263.6-201ENST00000631132 1963 ntBASIC2.43□□□□□ -2.02
APOBP04114 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 MAP1LC3BP1-201ENST00000417653 379 ntBASIC2.43□□□□□ -2.02
APOBP04114 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC2.43□□□□□ -2.02
APOBP04114 AC025750.2-201ENST00000442609 450 ntBASIC2.43□□□□□ -2.02
APOBP04114 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.43□□□□□ -2.02
APOBP04114 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 RPS3AP14-201ENST00000483907 780 ntBASIC2.43□□□□□ -2.02
APOBP04114 HMGB1P21-201ENST00000502313 581 ntBASIC2.43□□□□□ -2.02
APOBP04114 AC090286.3-201ENST00000573133 187 ntBASIC2.43□□□□□ -2.02
APOBP04114 BNIP3P10-201ENST00000605360 577 ntBASIC2.43□□□□□ -2.02
APOBP04114 AP001642.1-201ENST00000624727 2117 ntBASIC2.43□□□□□ -2.02
APOBP04114 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 AC005831.1-201ENST00000624384 1697 ntBASIC2.43□□□□□ -2.02
APOBP04114 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 RAD23BP3-201ENST00000454157 1152 ntBASIC2.43□□□□□ -2.02
APOBP04114 RN7SL809P-201ENST00000482040 297 ntBASIC2.43□□□□□ -2.02
APOBP04114 AC010486.1-201ENST00000511793 424 ntBASIC2.43□□□□□ -2.02
APOBP04114 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.43□□□□□ -2.02
APOBP04114 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC2.43□□□□□ -2.02
APOBP04114 COX6CP4-201ENST00000605798 228 ntBASIC2.43□□□□□ -2.02
APOBP04114 AC026368.1-201ENST00000614934 690 ntBASIC2.43□□□□□ -2.02
APOBP04114 AC005086.4-201ENST00000623065 213 ntBASIC2.43□□□□□ -2.02
APOBP04114 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 VPS35P1-201ENST00000563400 1518 ntBASIC2.43□□□□□ -2.02
APOBP04114 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOBP04114 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
APOBP04114 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 NACA3P-201ENST00000359690 648 ntBASIC2.42□□□□□ -2.02
APOBP04114 MIR1911-201ENST00000410783 80 ntBASIC2.42□□□□□ -2.02
APOBP04114 HMGN2P27-201ENST00000427352 270 ntBASIC2.42□□□□□ -2.02
APOBP04114 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC2.42□□□□□ -2.02
APOBP04114 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC2.42□□□□□ -2.02
APOBP04114 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.42□□□□□ -2.02
APOBP04114 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
APOBP04114 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
APOBP04114 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
APOBP04114 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 TEK-205ENST00000615002 4666 ntTSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 RNA5SP175-201ENST00000364275 119 ntBASIC2.42□□□□□ -2.02
APOBP04114 AC084198.1-201ENST00000477747 402 ntBASIC2.42□□□□□ -2.02
APOBP04114 DEFB109A-201ENST00000482450 265 ntBASIC2.42□□□□□ -2.02
APOBP04114 AC012158.1-204ENST00000483430 465 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms