Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PDGFBP01127 RPS3AP25-201ENST00000411660 793 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 AC013404.1-201ENST00000413068 249 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 SNRPFP1-201ENST00000414761 252 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 NPM1P24-201ENST00000428039 894 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.65□□□□□ -1.67
PDGFBP01127 YME1L1P1-201ENST00000429435 297 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFBP01127 RPS24P8-201ENST00000431490 402 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.65□□□□□ -1.67
PDGFBP01127 AL451139.1-201ENST00000434718 346 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 RPS29P7-201ENST00000439662 171 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 RRM2P4-201ENST00000441721 562 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 HMGB3P9-201ENST00000441799 583 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFBP01127 AC239809.1-201ENST00000450470 217 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 PRSS3P4-201ENST00000453323 162 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 AC245028.2-201ENST00000458673 253 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 AC079804.1-201ENST00000461922 436 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 PGBD4P4-201ENST00000509673 613 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFBP01127 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFBP01127 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFBP01127 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFBP01127 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.65□□□□□ -1.67
PDGFBP01127 SETP1-201ENST00000556014 845 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.65□□□□□ -1.67
PDGFBP01127 AC009318.3-201ENST00000616916 503 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 AC112484.5-201ENST00000624189 228 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PDGFBP01127 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PDGFBP01127 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDGFBP01127 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PDGFBP01127 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.65□□□□□ -1.67
PDGFBP01127 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PDGFBP01127 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PDGFBP01127 LARP1BP1-201ENST00000506036 1359 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDGFBP01127 AC009643.2-201ENST00000603543 1448 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDGFBP01127 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDGFBP01127 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.64□□□□□ -1.67
PDGFBP01127 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDGFBP01127 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PDGFBP01127 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.64□□□□□ -1.67
PDGFBP01127 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
PDGFBP01127 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDGFBP01127 Z98745.1-201ENST00000402553 494 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 AL356095.1-201ENST00000417217 199 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 PDSS1P1-201ENST00000422953 1114 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.64□□□□□ -1.67
PDGFBP01127 AL691517.1-201ENST00000440833 1235 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.64□□□□□ -1.67
PDGFBP01127 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.64□□□□□ -1.67
PDGFBP01127 RPL7P48-201ENST00000461513 746 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.64□□□□□ -1.67
PDGFBP01127 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDGFBP01127 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.64□□□□□ -1.67
PDGFBP01127 HMGB1P46-201ENST00000520062 610 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 PDCD5P1-201ENST00000543528 309 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.64□□□□□ -1.67
PDGFBP01127 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.64□□□□□ -1.67
PDGFBP01127 AC084757.1-201ENST00000559987 490 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 RN7SL290P-201ENST00000578661 300 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 MIR4716-201ENST00000579628 84 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.64□□□□□ -1.67
PDGFBP01127 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.64□□□□□ -1.67
PDGFBP01127 AC020634.1-201ENST00000608701 549 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 AC110792.4-201ENST00000609843 298 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 BNIP3P41-202ENST00000616656 861 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 CDRT1-208ENST00000630868 794 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
PDGFBP01127 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PDGFBP01127 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PDGFBP01127 AL034370.1-201ENST00000397254 1590 ntBASIC4.64□□□□□ -1.67
PDGFBP01127 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDGFBP01127 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.64□□□□□ -1.67
PDGFBP01127 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDGFBP01127 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.64□□□□□ -1.67
PDGFBP01127 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PDGFBP01127 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 Z95327.2-201ENST00000414579 1873 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.63□□□□□ -1.67
PDGFBP01127 AC008033.1-201ENST00000216407 1162 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PDGFBP01127 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PDGFBP01127 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.63□□□□□ -1.67
PDGFBP01127 AC091390.3-201ENST00000426478 338 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.63□□□□□ -1.67
PDGFBP01127 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.63□□□□□ -1.67
PDGFBP01127 AL357520.1-201ENST00000441557 453 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 RPL21P89-201ENST00000444021 467 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 RPL34P26-201ENST00000445636 354 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms