Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC140172.1-201ENST00000502928 141 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 MRPS33P2-201ENST00000507850 322 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX2-2O95096 RN7SKP265-201ENST00000516448 223 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
NKX2-2O95096 HMGN2P6-201ENST00000551091 273 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AC044913.1-201ENST00000557200 430 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX2-2O95096 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX2-2O95096 AL445435.1-201ENST00000604232 665 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AC099676.1-201ENST00000608886 657 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AP005137.2-201ENST00000609238 400 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AL592148.2-201ENST00000612210 372 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AC234782.5-201ENST00000617723 324 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AC006963.1-201ENST00000624003 1052 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 AL355480.1-201ENST00000629041 99 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
NKX2-2O95096 AC008758.3-201ENST00000507003 1829 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
NKX2-2O95096 AC099786.3-201ENST00000565735 1410 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 AL731532.2-201ENST00000623542 1953 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NKX2-2O95096 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-2O95096 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-2O95096 AL355578.1-201ENST00000607405 1328 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-2O95096 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NKX2-2O95096 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NKX2-2O95096 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NKX2-2O95096 SNORA70-201ENST00000384436 135 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NKX2-2O95096 AL357515.1-201ENST00000402967 542 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 AL136310.1-201ENST00000404926 654 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 RPL23AP27-201ENST00000415161 451 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 TBCAP2-201ENST00000416175 326 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 RPL12P34-201ENST00000424532 479 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 RAC1P8-201ENST00000427086 527 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-2O95096 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-2O95096 AL627308.1-201ENST00000435693 821 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 VN1R25P-201ENST00000443385 738 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-2O95096 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-2O95096 PTGES3P5-201ENST00000455109 434 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-2O95096 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-2O95096 RPS4XP14-201ENST00000493072 781 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-2O95096 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-2O95096 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 RNA5SP249-201ENST00000516127 99 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 SCARNA21.2-201ENST00000516600 166 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 RNA5SP392-201ENST00000516905 112 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 SMARCE1P4-201ENST00000523647 241 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.54□□□□□ -1.68
NKX2-2O95096 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-2O95096 LSM3P2-201ENST00000551246 273 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-2O95096 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-2O95096 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-2O95096 CYCSP40-201ENST00000575927 294 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 OR7E18P-201ENST00000592589 702 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 AC010424.2-201ENST00000607594 443 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 AP001521.2-201ENST00000608772 546 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 AC016769.4-201ENST00000616893 535 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-2O95096 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-2O95096 AC138965.3-201ENST00000623875 498 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-2O95096 AC087821.2-201ENST00000637086 450 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 AC000367.1-201ENST00000452711 1766 ntBASIC4.54□□□□□ -1.68
NKX2-2O95096 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-2O95096 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NKX2-2O95096 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-2O95096 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-2O95096 AC005261.4-201ENST00000600047 1385 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms