Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.24□□□□□ -1.57
PHGDHO43175 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.24□□□□□ -1.57
PHGDHO43175 AL162431.4-201ENST00000604674 411 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.24□□□□□ -1.57
PHGDHO43175 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.24□□□□□ -1.57
PHGDHO43175 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 DBF4P1-201ENST00000412976 1892 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.23□□□□□ -1.57
PHGDHO43175 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 Y_RNA.408-201ENST00000383987 102 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 CTSL3P-202ENST00000412179 788 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 AC019050.1-201ENST00000418508 492 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 AC090960.1-201ENST00000421072 306 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.23□□□□□ -1.57
PHGDHO43175 AC079807.1-201ENST00000429993 481 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 AC012075.1-201ENST00000436549 580 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 YWHAZP7-201ENST00000436906 631 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.23□□□□□ -1.57
PHGDHO43175 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.23□□□□□ -1.57
PHGDHO43175 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.23□□□□□ -1.57
PHGDHO43175 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 MTND1P16-201ENST00000465177 898 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 RN7SL51P-201ENST00000468230 285 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 LINC00888-204ENST00000487386 421 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 RPF2P2-201ENST00000504693 896 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.23□□□□□ -1.57
PHGDHO43175 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.23□□□□□ -1.57
PHGDHO43175 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.23□□□□□ -1.57
PHGDHO43175 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.23□□□□□ -1.57
PHGDHO43175 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.23□□□□□ -1.57
PHGDHO43175 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.23□□□□□ -1.57
PHGDHO43175 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.23□□□□□ -1.57
PHGDHO43175 MTCYBP27-201ENST00000555160 670 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 AC090888.3-201ENST00000558917 509 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 AC015720.2-201ENST00000567709 334 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 OR4K7P-201ENST00000580232 945 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 AC022069.1-201ENST00000582910 658 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 MIR4310-201ENST00000582950 57 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.23□□□□□ -1.57
PHGDHO43175 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 AC096553.1-201ENST00000605169 829 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.23□□□□□ -1.57
PHGDHO43175 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 AP001962.1-201ENST00000624114 559 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.23□□□□□ -1.57
PHGDHO43175 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PHGDHO43175 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.23□□□□□ -1.57
PHGDHO43175 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PHGDHO43175 AC008079.2-201ENST00000623543 20396 ntBASIC5.23□□□□□ -1.57
PHGDHO43175 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.22□□□□□ -1.57
PHGDHO43175 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 AC016716.1-201ENST00000265882 708 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 RNA5SP319-201ENST00000362768 119 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 RNU4-4P-201ENST00000364588 130 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 RNU5A-2P-201ENST00000384337 116 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 PRELID3BP11-201ENST00000414230 479 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.22□□□□□ -1.57
PHGDHO43175 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.22□□□□□ -1.57
PHGDHO43175 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.22□□□□□ -1.57
PHGDHO43175 AL593851.1-201ENST00000426171 157 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 SKP1P3-201ENST00000429280 487 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 RPL37P1-201ENST00000432310 284 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 CLUHP1-201ENST00000435012 1190 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 HMGN1P36-201ENST00000446623 298 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC073909.1-201ENST00000447112 999 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.22□□□□□ -1.57
PHGDHO43175 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.22□□□□□ -1.57
PHGDHO43175 RNU7-125P-201ENST00000458760 62 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC010468.1-201ENST00000461022 817 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC010307.1-201ENST00000467206 836 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms