Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEDD8-MDP1E9PL57 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 RPS26P8-201ENST00000393490 348 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 GSTA12P-201ENST00000402398 508 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 MTND4LP13-201ENST00000425022 298 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC112206.1-201ENST00000468416 477 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL7P19-201ENST00000469948 618 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 RN7SL812P-201ENST00000493791 279 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 RPS4XP18-201ENST00000495480 763 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 HMGB1P3-201ENST00000502802 616 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 ATP1B1P1-201ENST00000509767 915 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC00557-201ENST00000563184 1279 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 HMGB2P1-201ENST00000591146 634 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC133552.5-201ENST00000604266 540 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AL353600.1-201ENST00000608148 251 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC135803.1-201ENST00000608748 565 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC019131.2-201ENST00000609071 870 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AL596275.2-204ENST00000641628 552 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AL596275.2-206ENST00000641957 626 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 AC126323.6-202ENST00000568092 3511 ntBASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NEDD8-MDP1E9PL57 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC139713.2-215ENST00000641428 5037 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 RNU6-729P-201ENST00000384399 107 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 SNORA68.2-201ENST00000391263 128 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 Z86062.1-201ENST00000406773 777 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 RN7SKP199-201ENST00000410325 305 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 BTF3P9-201ENST00000418784 283 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 HMGB3P10-201ENST00000434734 572 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC093716.1-201ENST00000435923 377 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 RPS26P2-201ENST00000440331 348 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC114495.1-201ENST00000441274 436 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 CALM1P2-201ENST00000452941 448 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC009963.2-201ENST00000453431 138 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC021146.7-201ENST00000509604 775 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AP003730.1-201ENST00000524605 285 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 OR5BC1P-201ENST00000529327 739 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 TVP23BP1-201ENST00000557500 617 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC010857.1-201ENST00000606398 594 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC025175.1-201ENST00000606482 759 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC242628.1-201ENST00000606810 391 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 DDX18P3-201ENST00000404856 2007 ntBASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NEDD8-MDP1E9PL57 MAPK10-286ENST00000641208 8747 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms