Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC106791.2-201ENST00000604680 391 ntBASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC090525.3-201ENST00000605601 189 ntBASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC090425.2-201ENST00000608818 501 ntBASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 HULC.1-201ENST00000612720 240 ntBASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC022509.4-201ENST00000621404 572 ntBASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 AL137100.1-201ENST00000556703 1620 ntBASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 AP005901.5-201ENST00000545779 1796 ntBASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV5-3A0A0A0MS03 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 FAM3C2-201ENST00000312214 681 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 RNU6-560P-201ENST00000364007 108 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 Y_RNA.201-201ENST00000364052 96 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 RNA5SP132-201ENST00000364725 118 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 RNU6-98P-201ENST00000384173 107 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 SNORA70.10-201ENST00000384515 134 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC093719.1-202ENST00000392735 373 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AL592291.1-201ENST00000403830 352 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 BTF3L4P1-201ENST00000413813 468 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 RGS17P1-201ENST00000423358 553 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AL035407.1-201ENST00000429211 571 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 MTCO1P3-201ENST00000429327 192 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 MTND1P20-201ENST00000430341 950 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 RPL7L1P9-201ENST00000431298 745 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 RPS29P14-201ENST00000431518 171 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 NMNAT1P2-201ENST00000435192 860 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 YWHAZP7-201ENST00000436906 631 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 MRPL48P1-201ENST00000445390 636 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AL109741.2-201ENST00000455561 343 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC009127.1-201ENST00000467090 155 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC108751.2-201ENST00000469993 231 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 BZW1P2-201ENST00000473537 826 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 PPIAP19-201ENST00000486414 492 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AP003033.1-201ENST00000527244 415 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AP000619.3-201ENST00000535634 1127 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC092747.2-201ENST00000545069 983 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 NIFKP8-201ENST00000560500 874 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 MIR3614-201ENST00000581261 86 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC095055.1-201ENST00000603472 1113 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AL163642.2-201ENST00000604722 1019 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC087783.2-201ENST00000605070 562 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC091931.1-201ENST00000623488 728 ntBASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRBV5-3A0A0A0MS03 DDX43P2-201ENST00000604753 1354 ntBASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 ECM1P2-201ENST00000503354 1577 ntBASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 SNORA17.1-201ENST00000362945 126 ntBASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 RNU6-707P-201ENST00000364647 95 ntBASIC4.66□□□□□ -1.66
TRBV5-3A0A0A0MS03 RNU6-1320P-201ENST00000390838 107 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms