Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MTND2P25-201ENST00000449028 610 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AC092691.2-201ENST00000461787 803 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 RPL23AP71-201ENST00000470966 469 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 RN7SL271P-201ENST00000487601 295 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AC091167.1-201ENST00000492017 396 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 RPS27AP13-201ENST00000498403 237 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AC008745.1-201ENST00000604064 271 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 ARF4P1-201ENST00000605447 541 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AP003392.5-201ENST00000607857 415 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AC004948.1-201ENST00000609858 672 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 MIR3653-201ENST00000625572 110 ntBASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAV27A0A087WT01 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 EIF4A1P3-201ENST00000411521 244 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AL590609.2-201ENST00000421430 368 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AL356535.1-201ENST00000440335 398 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC104306.1-201ENST00000449702 371 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 FABP3P2-201ENST00000453169 399 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC104849.1-201ENST00000462623 405 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC107015.1-201ENST00000466902 747 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 RPS6P4-201ENST00000494693 758 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 PDCD5P1-201ENST00000543528 309 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 CD24P2-201ENST00000565486 219 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 MRPS35P3-201ENST00000603189 709 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AL034374.2-201ENST00000605281 548 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AL158196.1-201ENST00000616786 434 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AL023881.1-201ENST00000621088 301 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 AC005261.4-201ENST00000600047 1385 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 IPO8P1-201ENST00000455509 3109 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAV27A0A087WT01 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 CCT8P1-201ENST00000413611 1657 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms