Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF6Q9Y252 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC087190.4-201ENST00000574616 8334 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF6Q9Y252 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF6Q9Y252 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC092079.1-201ENST00000558620 1985 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 MIR92A2-201ENST00000385299 75 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 AL512430.2-201ENST00000406786 339 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC105402.1-201ENST00000413336 545 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 RPL21P43-201ENST00000425440 472 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 RPL23AP1-201ENST00000428990 471 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF6Q9Y252 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 RNU6-1218P-201ENST00000458990 108 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 PPBPP1-201ENST00000510807 373 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 RNA5SP154-201ENST00000516193 111 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 BUD31P1-201ENST00000521828 359 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 TOMM20P2-201ENST00000540082 421 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 AL049870.4-201ENST00000555741 486 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC242628.1-201ENST00000606810 391 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AL445423.1-201ENST00000609941 536 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC011472.4-201ENST00000615848 491 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC003001.2-201ENST00000616294 831 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC006338.2-201ENST00000616864 791 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC015908.5-201ENST00000623289 343 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC011815.3-201ENST00000624194 473 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF6Q9Y252 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF6Q9Y252 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF6Q9Y252 AL136164.3-201ENST00000624429 3978 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 AC139713.2-214ENST00000642059 1811 ntBASIC4.28□□□□□ -1.72
RNF6Q9Y252 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF6Q9Y252 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AL031119.1-201ENST00000404707 1879 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 CCT8P1-201ENST00000413611 1657 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF6Q9Y252 IGKV7-3-201ENST00000357453 298 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 RNA5SP52-201ENST00000362448 134 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 RNA5SP151-201ENST00000365632 117 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 AL590762.2-201ENST00000395798 571 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 AL049693.1-201ENST00000402760 611 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 LINC00993-201ENST00000420453 540 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AL645608.4-201ENST00000423619 154 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 RPL21P91-201ENST00000429231 479 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF6Q9Y252 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC073143.1-201ENST00000436316 395 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC090151.1-201ENST00000520784 730 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AL110118.1-201ENST00000553543 400 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC136624.4-201ENST00000573044 370 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 AP005119.2-201ENST00000579735 1105 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC015813.6-201ENST00000624409 5808 ntBASIC4.27□□□□□ -1.73
RNF6Q9Y252 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF6Q9Y252 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF6Q9Y252 AC027290.2-201ENST00000623210 18662 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF6Q9Y252 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF6Q9Y252 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF6Q9Y252 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 AL137100.1-201ENST00000556703 1620 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 SNORD113.2-201ENST00000364166 89 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 SNORD115-48-201ENST00000364764 76 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms