Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 MIR5708-201ENST00000579723 85 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AC012254.4-201ENST00000588843 273 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AC008555.7-201ENST00000605008 583 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AL390240.1-201ENST00000612950 384 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AC022106.2-201ENST00000620114 757 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 MTND5P30-201ENST00000452896 1731 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 AC009779.8-201ENST00000641684 4384 ntBASIC8.06□□□□□ -1.12
PDZRN3Q9UPQ7 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 BIN2P1-201ENST00000504996 1530 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 RN7SKP32-201ENST00000410167 303 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 RNA5SP118-201ENST00000410385 109 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 MTCO1P45-201ENST00000431457 267 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC007998.1-201ENST00000474156 672 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC027575.1-201ENST00000481064 460 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC022206.1-201ENST00000495947 347 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC091965.3-201ENST00000506236 208 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC109445.1-201ENST00000512356 383 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 OR4A40P-201ENST00000533878 948 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 DPPA3P2-201ENST00000553589 478 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC010591.1-201ENST00000603941 649 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC091488.1-201ENST00000604239 660 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC009220.3-201ENST00000604318 586 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 uc_338.5-201ENST00000611839 155 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC068831.8-201ENST00000620171 435 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC127024.6-201ENST00000621598 424 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 AC034229.2-201ENST00000566945 2508 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 LCOR-201ENST00000286067 4542 ntBASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PDZRN3Q9UPQ7 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 SAGE3P-201ENST00000619800 1635 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 MIR323A-201ENST00000362199 86 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 RNU6-1085P-201ENST00000363576 107 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AL450338.1-201ENST00000407987 512 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 RNA5SP178-201ENST00000410380 128 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 RN7SKP144-201ENST00000411108 279 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 PIGPP2-201ENST00000411569 458 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 RIMKLBP2-201ENST00000424737 654 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 RPL7P44-201ENST00000424827 742 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 NIPA2P1-201ENST00000426223 976 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AL033528.1-201ENST00000453780 140 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AC115223.1-201ENST00000466377 870 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AC068781.1-201ENST00000488231 618 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 RNU6-1281P-201ENST00000516223 105 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 RNA5SP206-201ENST00000516703 121 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 IGJP1-201ENST00000522682 475 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AC138832.1-201ENST00000522871 556 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AP002748.2-201ENST00000528671 348 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms