Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 RPS21P4-201ENST00000487122 248 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 RN7SL101P-201ENST00000496350 279 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AC091860.1-201ENST00000505723 432 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 HMGB1P1-201ENST00000522557 636 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 MTCO1P47-201ENST00000523889 1271 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AP000859.1-201ENST00000525536 307 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 MTCO3P15-201ENST00000526563 574 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 MTND2P26-201ENST00000528255 1029 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 ATP5F1P7-201ENST00000567330 760 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AC109446.2-201ENST00000567872 497 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AP001269.3-201ENST00000588718 329 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AC006272.2-201ENST00000594725 163 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 VN1R83P-201ENST00000595685 445 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AP000255.1-201ENST00000610276 676 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AC079395.2-201ENST00000610982 737 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AC074140.1-201ENST00000621617 208 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 MIR1322-201ENST00000638013 71 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AL359922.3-201ENST00000624779 1670 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 AC104446.1-201ENST00000613728 1321 ntBASIC5.2□□□□□ -1.58
AMFRQ9UKV5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.2□□□□□ -1.58
AMFRQ9UKV5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC073055.1-201ENST00000456901 1621 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC139713.2-215ENST00000641428 5037 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 RNU6-543P-201ENST00000362576 108 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 ERHP2-201ENST00000402323 299 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AL356131.1-201ENST00000405826 414 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 DUTP5-201ENST00000406790 469 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AL590084.1-201ENST00000407885 387 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 MIR1302-8-201ENST00000408342 128 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC013404.1-201ENST00000413068 249 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 RPL35AP24-201ENST00000413846 330 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AL513325.1-201ENST00000417716 1034 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC016907.1-201ENST00000419483 435 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 CHEK2P5-201ENST00000423877 246 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 RPL23AP4-201ENST00000427757 463 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 YWHAEP5-201ENST00000431545 765 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 MTCO1P52-201ENST00000433928 531 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 ARAFP2-201ENST00000440565 559 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 SPRYD7P1-201ENST00000443861 570 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 KNOP1P3-201ENST00000446933 426 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC233982.1-201ENST00000451247 436 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 CDC42P1-201ENST00000456658 548 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC108693.1-201ENST00000496068 432 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 MRPS33P3-201ENST00000513456 322 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 RNU5A-4P-201ENST00000516588 111 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 RN7SKP260-201ENST00000516907 149 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 Y_RNA.719-201ENST00000517156 106 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 NMNAT1P1-201ENST00000554095 876 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC095057.3-201ENST00000567102 1157 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AL354943.1-201ENST00000572103 781 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC011445.2-201ENST00000599274 173 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC105254.2-201ENST00000603636 436 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AP003392.5-201ENST00000607857 415 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AL021707.7-201ENST00000607991 416 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC139769.3-201ENST00000618383 175 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AC099494.2-201ENST00000623371 978 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 CASC19-264ENST00000641912 1184 ntBASIC5.19□□□□□ -1.58
AMFRQ9UKV5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AMFRQ9UKV5 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 372.5 ms