Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 RNA5SP135-201ENST00000517019 125 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 HMGB1P40-201ENST00000525121 540 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AC010198.2-201ENST00000550612 259 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AC110743.1-201ENST00000584870 478 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AC021171.1-201ENST00000603137 706 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AC092954.1-201ENST00000609121 445 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AP000255.1-201ENST00000610276 676 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 MIR6837-201ENST00000620884 64 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 AC124312.6-202ENST00000623624 418 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN3Q9NQS3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 SMG1P4-204ENST00000523028 4131 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 RNU6-560P-201ENST00000364007 108 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 RNU6-83P-201ENST00000384568 112 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AL161909.1-201ENST00000397390 712 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 DBIP1-201ENST00000401435 260 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AL133264.1-201ENST00000407157 562 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 NRBF2P2-201ENST00000413087 861 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AL590609.2-201ENST00000421430 368 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AL031736.2-201ENST00000426573 787 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC007559.1-201ENST00000428736 355 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 COX6CP18-201ENST00000448769 222 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 PNPLA4P1-201ENST00000458328 305 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC104689.1-201ENST00000473356 768 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 RN7SL447P-201ENST00000494711 245 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC024558.1-201ENST00000505008 528 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC008837.2-201ENST00000513076 418 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 RNU6-941P-201ENST00000516346 108 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 RN7SKP96-201ENST00000516948 297 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 C1GALT1P3-201ENST00000522049 819 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 NBEAP1-201ENST00000554452 979 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AL390726.5-202ENST00000564800 256 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 RPL10P14-201ENST00000565265 298 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC005341.1-201ENST00000571086 708 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AL354943.1-201ENST00000572103 781 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 BNIP3P26-201ENST00000600827 554 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 Z95327.3-201ENST00000610385 572 ntBASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NECTIN3Q9NQS3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC100757.1-201ENST00000616872 1835 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms