Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 RPS17P2-201ENST00000461663 408 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC091180.1-201ENST00000462104 372 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC021205.1-201ENST00000468797 348 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 BX284632.1-201ENST00000478218 541 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 RN7SKP147-201ENST00000517154 244 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AP002373.2-201ENST00000541631 1060 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 OR11J2P-201ENST00000555298 907 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 MIR4436B2-201ENST00000581415 91 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 MIR4436B1-201ENST00000583272 91 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AL020997.3-201ENST00000602843 359 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC064807.4-201ENST00000607201 407 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC007349.4-201ENST00000608114 532 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC011472.4-201ENST00000615848 491 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 LINC02211-204ENST00000642024 1070 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 RBPJP2-201ENST00000618187 1444 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC021242.1-201ENST00000507315 2035 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC111188.2-201ENST00000529697 1387 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 RNU6-452P-201ENST00000384406 107 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 TCEA1P4-201ENST00000415066 844 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC013429.2-201ENST00000418798 781 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC027644.1-201ENST00000419595 298 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 DDX39BP1-205ENST00000422507 192 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC012519.1-201ENST00000424588 610 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 RBMY2QP-201ENST00000429799 1147 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AL592437.1-201ENST00000443781 492 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 CASP3P1-201ENST00000446037 609 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 MRPL35P4-201ENST00000453682 566 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 HMGB1P4-201ENST00000455362 567 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 CDC42P1-201ENST00000456658 548 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 PRDX3P4-201ENST00000470828 747 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 RPS29P22-201ENST00000472363 168 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC090114.3-201ENST00000479267 829 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 RNA5SP464-201ENST00000516251 108 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC095057.3-201ENST00000567102 1157 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC124856.1-201ENST00000600819 896 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AL353778.1-201ENST00000603149 408 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC016877.3-201ENST00000606778 504 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 EIF3FP1-201ENST00000613970 806 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms