Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 MIR378H-201ENST00000579966 83 ntBASIC11.55□□□□□ -0.56
SCAF1Q9H7N4 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC11.55□□□□□ -0.56
SCAF1Q9H7N4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SCAF1Q9H7N4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC11.55□□□□□ -0.56
SCAF1Q9H7N4 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC11.55□□□□□ -0.56
SCAF1Q9H7N4 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SCAF1Q9H7N4 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC11.55□□□□□ -0.56
SCAF1Q9H7N4 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCAF1Q9H7N4 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AC138627.1-203ENST00000641872 1680 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 PTER-203ENST00000423462 3212 ntTSL 3 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 RNA5SP429-201ENST00000363688 109 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 Y_RNA.261-201ENST00000364631 102 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AL356421.1-201ENST00000403255 413 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 MRPL32P1-201ENST00000406301 247 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 RPL21P89-201ENST00000444021 467 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 RPS7P4-201ENST00000444127 582 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AC140059.1-201ENST00000489238 361 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AC026801.1-201ENST00000497178 464 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 OR7E83P-201ENST00000511021 970 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 Y_RNA.713-201ENST00000517013 96 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AC034114.1-201ENST00000520293 285 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AL021918.2-201ENST00000613415 194 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 RN7SL301P-202ENST00000618767 298 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AL161637.1-201ENST00000622380 412 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AC016582.3-206ENST00000636547 207 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 SAGE3P-201ENST00000619800 1635 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AC007614.2-201ENST00000569877 1851 ntBASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC11.54□□□□□ -0.56
SCAF1Q9H7N4 AC016251.2-201ENST00000623393 3089 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 Y_RNA.343-201ENST00000365354 112 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AP003170.5-201ENST00000397185 335 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AL161787.1-201ENST00000401543 174 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AL359643.1-201ENST00000404109 423 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 FAM183DP-201ENST00000421987 399 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 RPL7P46-201ENST00000425129 740 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 RPEP5-201ENST00000441137 268 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AC008267.6-201ENST00000441664 139 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 CEACAMP6-201ENST00000452007 574 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 RPL34P22-201ENST00000468193 318 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 UOX-201ENST00000471089 899 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 RN7SL58P-201ENST00000473445 294 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 MRPL57P6-201ENST00000506570 309 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 RNU6-1069P-201ENST00000516612 133 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 RNU7-4P-201ENST00000516961 62 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AL512782.1-201ENST00000603093 364 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AP001486.3-201ENST00000615334 372 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC11.53□□□□□ -0.56
SCAF1Q9H7N4 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SCAF1Q9H7N4 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SCAF1Q9H7N4 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SCAF1Q9H7N4 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
SCAF1Q9H7N4 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SCAF1Q9H7N4 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
SCAF1Q9H7N4 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC11.52□□□□□ -0.56
SCAF1Q9H7N4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms