Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AL391156.1-201ENST00000554965 554 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC004825.1-201ENST00000555068 586 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC009220.3-201ENST00000604318 586 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC103591.3-201ENST00000608684 209 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC005840.5-201ENST00000619166 599 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AL607023.1-201ENST00000620045 248 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC135068.5-201ENST00000624197 983 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC084035.1-201ENST00000634543 607 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 LINC01963-201ENST00000562038 3148 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 LINC02019-201ENST00000608605 2060 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AL022311.1-201ENST00000623726 19416 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AL731532.2-201ENST00000623542 1953 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AL355852.1-201ENST00000454081 1771 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 RNU6-931P-201ENST00000363850 107 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 SNORD65.1-201ENST00000390889 71 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AP000534.2-201ENST00000412729 568 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 OR2AT2P-201ENST00000413438 905 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 MTCO3P41-201ENST00000414801 328 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 DPRXP1-201ENST00000426312 460 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 SEPT7P5-201ENST00000434048 306 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 CYCSP11-201ENST00000436426 315 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC012512.1-201ENST00000446594 718 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 RFC5P1-201ENST00000454419 874 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 RPS23P6-201ENST00000466136 431 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 VPS26AP1-201ENST00000483197 979 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC069304.1-201ENST00000491593 704 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 RPS6P4-201ENST00000494693 758 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC023424.1-201ENST00000496058 459 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC005178.1-201ENST00000508392 440 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 MTCO2P32-201ENST00000514865 403 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 CYCSP22-201ENST00000517555 339 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 OR8G3P-201ENST00000533406 921 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC245297.2-201ENST00000610119 565 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 MIR6719-201ENST00000622428 87 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AL359715.5-201ENST00000623431 443 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AL691477.1-201ENST00000624398 162 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC116618.1-201ENST00000634617 774 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 KARSP3-201ENST00000571212 1504 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 NCLP2-201ENST00000416078 1462 ntBASIC5.07□□□□□ -1.6
AMBRA1Q9C0C7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AL603750.1-201ENST00000624216 1717 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms