Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC009962.1-201ENST00000567327 3813 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC007159.1-201ENST00000566529 4706 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AL672167.2-201ENST00000377164 879 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 Y_RNA.582-201ENST00000391023 95 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 RPL23AP17-201ENST00000401064 499 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 CYCSP45-201ENST00000402289 315 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 RN7SKP56-201ENST00000410513 331 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 RNU2-42P-201ENST00000410697 113 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 PIGPP2-201ENST00000411569 458 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC138393.2-201ENST00000414742 246 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC015977.1-201ENST00000418887 292 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AL139413.1-201ENST00000421309 217 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 DSTNP5-201ENST00000427921 523 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 FRG2FP-204ENST00000453982 852 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 RPS4XP12-201ENST00000461747 709 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 UBTFL6-201ENST00000477929 1024 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 RPS7P6-201ENST00000485777 579 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 RN7SL184P-201ENST00000488308 297 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC109462.1-201ENST00000491087 368 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC079382.1-201ENST00000493346 557 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 MTCO2P30-201ENST00000503662 364 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 OR4C2P-201ENST00000530855 1064 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC027026.1-201ENST00000532323 742 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC006960.3-201ENST00000561845 705 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 BNIP3P4-201ENST00000604946 565 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC004890.3-201ENST00000605566 1095 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC138649.3-201ENST00000622154 254 ntBASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 RNU6-543P-201ENST00000362576 108 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 RNU6-116P-201ENST00000384042 109 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 MIR550A3-201ENST00000390735 95 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 MTCYBP36-201ENST00000404146 440 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 RNU2-41P-201ENST00000410991 178 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 AC013404.1-201ENST00000413068 249 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 OR6E1P-201ENST00000414424 923 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 RPL21P32-201ENST00000419877 477 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 OR5W1P-201ENST00000423705 938 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 AC016027.5-201ENST00000427227 210 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 AC091390.1-201ENST00000433904 331 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 MTND4LP10-201ENST00000435146 291 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 RPL7P31-201ENST00000450192 724 ntBASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.62□□□□□ -1.35
SYNGAP1Q96PV0 AL445687.2-201ENST00000458156 728 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms