Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC017079.1-201ENST00000333650 415 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 RNU6-1339P-201ENST00000363574 91 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 RNU6-178P-201ENST00000384631 104 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 U3.32-201ENST00000408116 212 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 U3.36-201ENST00000408418 213 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 MIR1303-201ENST00000408625 86 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC107081.1-201ENST00000414975 361 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 TRGV6-201ENST00000417928 299 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 MOB1AP1-201ENST00000430903 535 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 HMGB1P45-201ENST00000435986 653 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC234064.1-201ENST00000436312 247 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC092013.1-201ENST00000438795 332 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 DNAJC19P8-201ENST00000452887 259 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC097484.1-201ENST00000471148 389 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 TRBV8-2-201ENST00000475637 270 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 RN7SL441P-201ENST00000492388 296 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 RNU6-513P-201ENST00000516104 104 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 RNA5SP34-201ENST00000516887 130 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 MTCO2P15-201ENST00000532655 656 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC090022.1-201ENST00000546569 311 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 HAUS8P1-201ENST00000549005 542 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC005412.1-201ENST00000580812 1049 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 RN7SL753P-201ENST00000581238 290 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 MIR4660-201ENST00000583549 74 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC091057.2-201ENST00000602594 792 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 BNIP3P4-201ENST00000604946 565 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 TAS2R6P-201ENST00000605022 826 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC010200.2-201ENST00000605098 235 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC016877.3-201ENST00000606778 504 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC097478.2-201ENST00000610572 514 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AL121612.2-201ENST00000612261 482 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC024257.5-201ENST00000612739 531 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AP000648.2-201ENST00000624182 404 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC079416.3-201ENST00000624479 549 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC090017.1-201ENST00000548612 1779 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 NSRP1P1-201ENST00000444067 1693 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 RN7SKP224-201ENST00000364140 325 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 SNORA66-201ENST00000384792 133 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 ATP5F1P2-201ENST00000398143 760 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC119751.3-201ENST00000399720 670 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 OR4K6P-201ENST00000416478 897 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 TMX2P1-201ENST00000436507 708 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AL354714.3-201ENST00000447284 493 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 USP9YP25-201ENST00000457708 443 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC018638.3-201ENST00000461273 132 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 RN7SL629P-201ENST00000489622 285 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC091951.3-201ENST00000504093 246 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC124293.1-201ENST00000530034 493 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms