Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-200P-201ENST00000364743 107 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 RNU4-48P-201ENST00000365559 182 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 MT-TP-201ENST00000387461 68 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 MIR1178-201ENST00000408396 91 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 Y_RNA.625-201ENST00000411256 107 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 PGBD4P6-201ENST00000421501 610 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 RN7SL39P-201ENST00000462264 297 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 MED28P2-201ENST00000475771 317 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC015724.1-201ENST00000478577 156 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 SUMO2P4-201ENST00000504193 276 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 SLC25A15P5-201ENST00000508033 253 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 RNU6-1023P-201ENST00000516137 106 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 TRIM77BP-201ENST00000524985 1119 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC090312.1-201ENST00000580637 348 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC011890.2-201ENST00000613393 294 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 AL732372.2-225ENST00000642124 456 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC092999.1-201ENST00000624004 1924 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC010615.1-201ENST00000594254 1764 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 RNU6-1252P-201ENST00000363054 104 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 RNA5SP140-201ENST00000364524 92 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 RNA5SP485-201ENST00000365053 119 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 RNU6-657P-201ENST00000383904 107 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 SNORA70G-201ENST00000383923 142 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 RNU1-149P-201ENST00000390870 161 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AL590635.1-201ENST00000406314 586 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 RNA5SP345-201ENST00000410646 108 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC092106.2-201ENST00000436597 487 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC007967.1-201ENST00000455422 1159 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC079168.1-201ENST00000458741 345 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 SNORD127-201ENST00000458892 86 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC128716.1-201ENST00000475129 166 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 PABPC1P1-201ENST00000506347 591 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC024451.1-201ENST00000508013 779 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC025465.3-201ENST00000510570 311 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC103843.2-201ENST00000530523 682 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AP000857.1-201ENST00000532151 543 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 MIR5186-201ENST00000577504 120 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AP005119.1-201ENST00000580956 292 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 BNIP3P25-201ENST00000596023 559 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC078899.3-201ENST00000599065 212 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC132825.6-201ENST00000638861 357 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 AL731566.1-201ENST00000620490 1937 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms