Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 MIR708-201ENST00000390708 88 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 RNA5SP372-201ENST00000390836 115 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 HSPD1P16-201ENST00000402302 394 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AL121834.1-202ENST00000404494 277 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AC009237.10-201ENST00000414112 510 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 BTF3P10-201ENST00000433415 495 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 CEACAMP1-201ENST00000434624 1035 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 RPL12P46-201ENST00000436610 195 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 GEMIN8P3-201ENST00000445417 720 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AL162388.1-201ENST00000450912 352 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 RN7SL385P-201ENST00000468873 276 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 RN7SL41P-201ENST00000476144 297 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AC108475.1-201ENST00000507880 950 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 NDUFB4P12-201ENST00000513465 390 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 RNA5SP519-201ENST00000516480 119 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 CYCSP29-201ENST00000533731 318 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 MIR3939-201ENST00000582614 106 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AL590392.1-201ENST00000604960 446 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AC138473.1-201ENST00000605717 526 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AC239803.2-201ENST00000610161 430 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AL138721.1-201ENST00000616756 179 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AL158196.1-201ENST00000616786 434 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 AC110792.3-201ENST00000595906 1614 ntBASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.3□□□□□ -1.72
ECHDC3Q96DC8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 AC009313.2-201ENST00000417893 1941 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 IL6STP1-201ENST00000346911 1020 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 RNA5SP28-201ENST00000363841 119 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 RNA5SP36-201ENST00000410197 133 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 RBMY1KP-201ENST00000423480 476 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 RSL24D1P6-201ENST00000426934 401 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 RPL23AP4-201ENST00000427757 463 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 SKP1P3-201ENST00000429280 487 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 AC069277.2-201ENST00000454211 432 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 AC133473.1-201ENST00000455173 299 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 AC005008.1-201ENST00000456151 612 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 OR7L1P-201ENST00000456181 380 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 PSMC1P13-201ENST00000458195 985 ntBASIC4.29□□□□□ -1.72
ECHDC3Q96DC8 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms