Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOPBP1Q92547 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TOPBP1Q92547 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOPBP1Q92547 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TOPBP1Q92547 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOPBP1Q92547 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 AL035423.1-201ENST00000420331 213 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 AL158156.1-201ENST00000422509 473 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 RBMY1KP-201ENST00000423480 476 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 FTH1P25-201ENST00000447665 469 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOPBP1Q92547 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 MRPS21P9-201ENST00000571150 257 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.66□□□□□ -1.34
TOPBP1Q92547 AC064801.1-201ENST00000612025 407 ntBASIC6.66□□□□□ -1.34
TOPBP1Q92547 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TOPBP1Q92547 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
TOPBP1Q92547 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.65□□□□□ -1.34
TOPBP1Q92547 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TOPBP1Q92547 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TOPBP1Q92547 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TOPBP1Q92547 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
TOPBP1Q92547 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
TOPBP1Q92547 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.65□□□□□ -1.35
TOPBP1Q92547 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.65□□□□□ -1.35
TOPBP1Q92547 HIST1H2APS3-201ENST00000403259 134 ntBASIC6.65□□□□□ -1.35
TOPBP1Q92547 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.65□□□□□ -1.35
TOPBP1Q92547 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TOPBP1Q92547 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.65□□□□□ -1.35
TOPBP1Q92547 RPL6P9-201ENST00000466502 859 ntBASIC6.65□□□□□ -1.35
TOPBP1Q92547 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TOPBP1Q92547 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.65□□□□□ -1.35
TOPBP1Q92547 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC6.65□□□□□ -1.35
TOPBP1Q92547 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.65□□□□□ -1.35
TOPBP1Q92547 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.65□□□□□ -1.35
TOPBP1Q92547 AP005264.7-201ENST00000625003 745 ntBASIC6.65□□□□□ -1.35
TOPBP1Q92547 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC6.65□□□□□ -1.35
TOPBP1Q92547 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
TOPBP1Q92547 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TOPBP1Q92547 ZNF402P-201ENST00000404435 3100 ntBASIC6.64□□□□□ -1.35
TOPBP1Q92547 AC083899.2-201ENST00000423285 1376 ntBASIC6.64□□□□□ -1.35
TOPBP1Q92547 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TOPBP1Q92547 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.64□□□□□ -1.35
TOPBP1Q92547 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TOPBP1Q92547 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.64□□□□□ -1.35
TOPBP1Q92547 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TOPBP1Q92547 SNORA3.3-201ENST00000408712 125 ntBASIC6.64□□□□□ -1.35
TOPBP1Q92547 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.64□□□□□ -1.35
TOPBP1Q92547 RPS29P2-201ENST00000479278 136 ntBASIC6.64□□□□□ -1.35
TOPBP1Q92547 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.64□□□□□ -1.35
TOPBP1Q92547 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.64□□□□□ -1.35
TOPBP1Q92547 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.64□□□□□ -1.35
TOPBP1Q92547 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
TOPBP1Q92547 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
TOPBP1Q92547 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
TOPBP1Q92547 EOGT-210ENST00000615922 1931 ntBASIC6.63□□□□□ -1.35
TOPBP1Q92547 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.63□□□□□ -1.35
TOPBP1Q92547 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.63□□□□□ -1.35
TOPBP1Q92547 FABP3P2-201ENST00000453169 399 ntBASIC6.63□□□□□ -1.35
TOPBP1Q92547 AC112206.1-201ENST00000468416 477 ntBASIC6.63□□□□□ -1.35
TOPBP1Q92547 RN7SL601P-201ENST00000471221 293 ntBASIC6.63□□□□□ -1.35
TOPBP1Q92547 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.63□□□□□ -1.35
TOPBP1Q92547 NPM1P47-201ENST00000560843 856 ntBASIC6.63□□□□□ -1.35
TOPBP1Q92547 RPL23AP87-202ENST00000573039 466 ntBASIC6.63□□□□□ -1.35
TOPBP1Q92547 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC6.63□□□□□ -1.35
TOPBP1Q92547 AC079880.2-201ENST00000603790 1213 ntBASIC6.63□□□□□ -1.35
TOPBP1Q92547 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.63□□□□□ -1.35
TOPBP1Q92547 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
TOPBP1Q92547 AC005261.2-201ENST00000593427 4258 ntBASIC6.63□□□□□ -1.35
TOPBP1Q92547 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TOPBP1Q92547 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC6.63□□□□□ -1.35
TOPBP1Q92547 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TOPBP1Q92547 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOPBP1Q92547 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOPBP1Q92547 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.62□□□□□ -1.35
TOPBP1Q92547 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOPBP1Q92547 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.62□□□□□ -1.35
TOPBP1Q92547 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.62□□□□□ -1.35
TOPBP1Q92547 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.62□□□□□ -1.35
TOPBP1Q92547 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC6.62□□□□□ -1.35
TOPBP1Q92547 RPS26P2-201ENST00000440331 348 ntBASIC6.62□□□□□ -1.35
TOPBP1Q92547 RPL21P23-201ENST00000446654 460 ntBASIC6.62□□□□□ -1.35
TOPBP1Q92547 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TOPBP1Q92547 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.62□□□□□ -1.35
TOPBP1Q92547 PHBP17-201ENST00000528576 541 ntBASIC6.62□□□□□ -1.35
TOPBP1Q92547 OR5B10P-201ENST00000532869 642 ntBASIC6.62□□□□□ -1.35
TOPBP1Q92547 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.62□□□□□ -1.35
TOPBP1Q92547 AC022968.1-201ENST00000567372 442 ntBASIC6.62□□□□□ -1.35
TOPBP1Q92547 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.62□□□□□ -1.35
TOPBP1Q92547 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.62□□□□□ -1.35
TOPBP1Q92547 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOPBP1Q92547 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOPBP1Q92547 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOPBP1Q92547 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms