Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC010350.1-201ENST00000504908 231 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 OR5H4P-201ENST00000510851 923 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 Y_RNA.655-201ENST00000515919 96 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC027308.1-201ENST00000517993 110 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC044913.1-201ENST00000557200 430 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 FKBP1AP1-201ENST00000594588 318 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RNU6-368P-201ENST00000620928 107 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RNU6-538P-201ENST00000622329 107 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC087821.2-201ENST00000637086 450 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 CDC27P2-201ENST00000425026 1922 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AL049737.1-201ENST00000413920 1403 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC006484.1-201ENST00000435086 1884 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC100871.1-201ENST00000507871 1456 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 PANDAR-201ENST00000629595 1506 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC007996.1-201ENST00000620414 2821 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 Y_RNA.192-201ENST00000363977 102 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 RNU4-4P-201ENST00000364588 130 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 RNA5SP132-201ENST00000364725 118 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 RNU1-43P-201ENST00000365052 165 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 RNU6-157P-201ENST00000383957 107 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 MIR323B-201ENST00000385269 82 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC092642.1-201ENST00000392417 425 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 HSFY4P-201ENST00000415994 1181 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AL121878.1-201ENST00000418638 859 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC006960.1-201ENST00000419980 153 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 RPS29P9-201ENST00000440360 171 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 MTND2P4-201ENST00000445034 1004 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 NPM1P19-201ENST00000450070 712 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 RAP1BP2-201ENST00000478270 544 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 OR2A20P-203ENST00000498397 1268 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC023632.1-201ENST00000518463 375 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC024940.3-201ENST00000538551 316 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 DUXAP1-201ENST00000556632 463 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC080013.3-201ENST00000606839 578 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC026124.2-201ENST00000621847 656 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC145207.9-201ENST00000623802 325 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC098679.4-201ENST00000624241 654 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 CASC19-206ENST00000641028 1430 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 AL137100.1-201ENST00000556703 1620 ntBASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4AQ8WYN0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms