Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPL23AP38-201ENST00000423801 469 ntBASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 EIF1P3-201ENST00000423841 334 ntBASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 ARAFP2-201ENST00000440565 559 ntBASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 AC006326.1-201ENST00000445465 787 ntBASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 MIR634-201ENST00000385208 97 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AL450992.3-201ENST00000413192 568 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 NPM1P25-201ENST00000429734 854 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 RPL37P1-201ENST00000432310 284 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AL356276.2-201ENST00000435919 558 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AC099522.1-202ENST00000514718 367 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AL589935.2-201ENST00000616471 1231 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AC138627.1-204ENST00000641894 765 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 RNA5SP175-201ENST00000364275 119 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 RNU6ATAC-201ENST00000408749 126 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 RPL7P2-201ENST00000427639 268 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 RPL21P6-201ENST00000479171 504 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 RN7SL810P-201ENST00000493031 276 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AC084783.1-201ENST00000565846 910 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 AC022146.1-201ENST00000595307 847 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 FAM27D1-201ENST00000612308 341 ntBASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM3Q8TF72 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 AC021242.1-201ENST00000507315 2035 ntBASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 RNA5SP399-201ENST00000364003 117 ntBASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 SETP6-201ENST00000479329 568 ntBASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 AC017007.3-201ENST00000479865 435 ntBASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 AC010476.1-201ENST00000519111 851 ntBASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 AP000619.3-201ENST00000535634 1127 ntBASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 AL157762.1-201ENST00000619612 415 ntBASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 AL133243.3-201ENST00000617415 3004 ntBASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SHROOM3Q8TF72 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC006011.1-201ENST00000442758 349 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC006064.5-201ENST00000541782 248 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 HNRNPCP4-201ENST00000571636 900 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 MIR6875-201ENST00000617506 72 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms