Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 SNORA62.2-201ENST00000364672 152 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 MIR298-201ENST00000401212 88 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 RNU6-603P-201ENST00000411403 107 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 LINC01347-201ENST00000417964 355 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 SEC63P1-201ENST00000425785 1258 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AC008072.1-201ENST00000434254 824 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AL590762.3-201ENST00000436372 640 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 SCARNA10-201ENST00000459255 330 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 RN7SL41P-201ENST00000476144 297 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 DEFB109F-201ENST00000491870 277 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AC021146.3-201ENST00000511911 260 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 CIR1P1-201ENST00000524055 1133 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AC079610.2-201ENST00000604818 690 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 MIR6719-201ENST00000622428 87 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 AC091905.2-201ENST00000623143 306 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 LINC01109-201ENST00000603837 3081 ntBASIC4.74□□□□□ -1.65
TRAF3IP1Q8TDR0 METTL21EP-201ENST00000298105 713 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 RPS24P12-201ENST00000402084 394 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 HSPD1P16-201ENST00000402302 394 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 MTCO3P4-201ENST00000419236 787 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 RPS12P10-201ENST00000427031 377 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 MED6P1-201ENST00000439659 713 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AC073587.1-201ENST00000447093 876 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 HMGB3P13-201ENST00000511263 607 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 RNU6-1102P-201ENST00000516149 96 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AC105129.1-201ENST00000560250 297 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 MIR4436B2-201ENST00000581415 91 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 MIR4436B1-201ENST00000583272 91 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AF230666.2-201ENST00000602328 725 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AC023762.1-201ENST00000603280 584 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AL133338.2-201ENST00000604292 736 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AL023583.1-201ENST00000607518 1143 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AC243654.2-201ENST00000612843 443 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 uc_338.18-201ENST00000615451 175 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 AL512283.1-201ENST00000606756 1384 ntBASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TRAF3IP1Q8TDR0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 MIR92A2-201ENST00000385299 75 ntBASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 HMGB1P13-201ENST00000406019 642 ntBASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 AC009237.10-201ENST00000414112 510 ntBASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 FO393419.3-201ENST00000428741 282 ntBASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 RPL12P3-201ENST00000440080 396 ntBASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 RPS27P5-201ENST00000444247 244 ntBASIC4.72□□□□□ -1.65
TRAF3IP1Q8TDR0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms