Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 GNL2P1-201ENST00000451274 2190 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RNU1-134P-201ENST00000362935 165 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RNU6-492P-201ENST00000363035 104 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RNU6-433P-201ENST00000363216 104 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RNU6-1283P-201ENST00000365314 105 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RNA5SP88-201ENST00000365560 109 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RNU1-136P-201ENST00000384181 164 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RN7SKP146-201ENST00000410242 334 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RNA5SP198-201ENST00000410376 127 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RPL21P108-201ENST00000413857 481 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 FNDC3CP-201ENST00000420795 1155 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 OR10T1P-201ENST00000424327 947 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC073069.1-201ENST00000428657 441 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RPS24P8-201ENST00000431490 402 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC069154.1-201ENST00000432914 542 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RPS7P3-201ENST00000443360 580 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 BNIP3P41-201ENST00000503774 571 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 HMGN1P16-201ENST00000508308 283 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RN7SKP283-201ENST00000517197 270 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 HIGD1AP6-201ENST00000521833 279 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AP002373.2-201ENST00000541631 1060 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AL133241.1-201ENST00000556832 487 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 SMIM12P1-201ENST00000603004 274 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AL513477.2-201ENST00000607858 568 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC243756.2-201ENST00000618406 463 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC092650.2-201ENST00000619984 902 ntBASIC5.51□□□□□ -1.53
HIPK4Q8NE63 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HIPK4Q8NE63 RLIMP2-201ENST00000427891 1563 ntBASIC5.5□□□□□ -1.53
HIPK4Q8NE63 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 SSXP3-201ENST00000442971 1300 ntBASIC5.5□□□□□ -1.53
HIPK4Q8NE63 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 OR10J6P-201ENST00000289731 930 ntBASIC5.5□□□□□ -1.53
HIPK4Q8NE63 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 RNU6-348P-201ENST00000384386 107 ntBASIC5.5□□□□□ -1.53
HIPK4Q8NE63 SNORA51.12-201ENST00000384448 134 ntBASIC5.5□□□□□ -1.53
HIPK4Q8NE63 MIR188-201ENST00000385034 86 ntBASIC5.5□□□□□ -1.53
HIPK4Q8NE63 RNU2-18P-201ENST00000411224 162 ntBASIC5.5□□□□□ -1.53
HIPK4Q8NE63 AL136133.1-201ENST00000413694 376 ntBASIC5.5□□□□□ -1.53
HIPK4Q8NE63 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.5□□□□□ -1.53
HIPK4Q8NE63 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms