Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 RNF6P1-201ENST00000444889 1784 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 SNORD1C-201ENST00000363315 78 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 RNU6-1066P-201ENST00000363573 105 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 RNA5SP88-201ENST00000365560 109 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AL589647.1-201ENST00000402485 466 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 HMGB1P20-201ENST00000402555 677 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AL121835.1-201ENST00000404250 354 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 MTCO3P31-201ENST00000405526 789 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 BTF3P7-201ENST00000407097 488 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 NME1P1-201ENST00000420914 382 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 HMGB3P24-201ENST00000433260 622 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 RPS12P17-201ENST00000438591 377 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 RPL7P59-201ENST00000447700 943 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC010307.1-201ENST00000467206 836 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC106872.4-201ENST00000510050 523 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 SCARNA6.1-201ENST00000516989 238 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AL049779.3-201ENST00000557141 606 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 NPM1P47-201ENST00000560843 856 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC020914.6-201ENST00000594327 272 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AF250324.2-201ENST00000608299 610 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC055764.2-201ENST00000610089 670 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 RN7SL544P-201ENST00000617232 284 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 RN7SL763P-201ENST00000620922 284 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC069234.4-201ENST00000621276 412 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC021106.3-201ENST00000623925 531 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC022164.1-201ENST00000568767 2673 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 CR848007.1-201ENST00000442354 1699 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AL034546.1-201ENST00000623740 3693 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC135352.1-201ENST00000506173 1418 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AL121950.1-201ENST00000624993 2077 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 RNU6-582P-201ENST00000362989 107 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 Y_RNA.88-201ENST00000363029 99 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 OR6C69P-201ENST00000394268 893 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AL136131.1-201ENST00000406079 803 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 MRPS21P2-201ENST00000424704 264 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC127526.2-201ENST00000426436 775 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AL365184.2-201ENST00000431139 435 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AL671855.1-201ENST00000446875 1203 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 TMED11P-201ENST00000479478 690 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 RPL7P38-201ENST00000488396 739 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC109464.2-201ENST00000510242 943 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC116347.2-201ENST00000514912 523 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC008429.4-201ENST00000521201 182 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 IGLV3-30-201ENST00000524362 298 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC137768.1-201ENST00000549998 553 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms