Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 RPL31P20-201ENST00000449593 360 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 ABCF2P2-201ENST00000450549 296 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 AC079804.1-201ENST00000461922 436 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 RPL21P126-201ENST00000470049 478 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 RN7SL690P-201ENST00000582087 240 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 ELOCP28-201ENST00000590044 317 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 AC110741.2-201ENST00000605278 268 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 AC100847.1-201ENST00000611316 481 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 MIR6891-201ENST00000618788 93 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 AC019278.1-201ENST00000623516 479 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 BMS1P21-201ENST00000634565 365 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC50Q8IVM0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 RNU4-7P-201ENST00000364758 141 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AL035419.1-201ENST00000397037 564 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 RNA5SP306-201ENST00000411087 107 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AC092570.3-201ENST00000420113 693 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AC069213.2-201ENST00000420238 366 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 NDUFA5P1-201ENST00000433858 341 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AC114495.1-201ENST00000441274 436 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AC243772.1-201ENST00000451620 410 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 HMGB3P22-202ENST00000451823 572 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 RPL7P22-201ENST00000466005 733 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AC106872.2-201ENST00000494303 480 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 PGBD4P4-201ENST00000509673 613 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 OR5BC1P-201ENST00000529327 739 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AP001160.4-201ENST00000596971 382 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 AL133370.2-201ENST00000619934 439 ntBASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC50Q8IVM0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 ASNSP1-201ENST00000518311 1939 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 RNA5SP322-201ENST00000363617 119 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 SNORA58B-201ENST00000364259 136 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 SNORA70F-201ENST00000384142 135 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 RNU1-89P-201ENST00000384592 164 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 MIR3065-201ENST00000390137 79 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 SNORD66.1-201ENST00000391230 76 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AC097374.1-203ENST00000400783 485 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 RNU2-50P-201ENST00000410494 143 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AL161631.1-201ENST00000417933 486 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AJ239321.1-201ENST00000424255 564 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 MTND4LP13-201ENST00000425022 298 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 MTCO1P45-201ENST00000431457 267 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 UBE2V2P3-201ENST00000433562 437 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 FTH1P16-201ENST00000435241 552 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AL162388.1-201ENST00000450912 352 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AC022431.1-201ENST00000450941 438 ntBASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC50Q8IVM0 ATG10-AS1-201ENST00000504846 648 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms