Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.63□□□□□ -1.67
LTBQ06643 AC006363.1-201ENST00000603806 463 ntBASIC4.63□□□□□ -1.67
LTBQ06643 AC080013.3-201ENST00000606839 578 ntBASIC4.63□□□□□ -1.67
LTBQ06643 AC090425.2-201ENST00000608818 501 ntBASIC4.63□□□□□ -1.67
LTBQ06643 AL159169.2-201ENST00000610061 1269 ntBASIC4.63□□□□□ -1.67
LTBQ06643 AL360219.1-201ENST00000610230 366 ntBASIC4.63□□□□□ -1.67
LTBQ06643 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.63□□□□□ -1.67
LTBQ06643 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LTBQ06643 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LTBQ06643 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LTBQ06643 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LTBQ06643 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LTBQ06643 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LTBQ06643 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LTBQ06643 MTND4P5-201ENST00000435821 1374 ntBASIC4.63□□□□□ -1.67
LTBQ06643 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.63□□□□□ -1.67
LTBQ06643 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LTBQ06643 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
LTBQ06643 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.63□□□□□ -1.67
LTBQ06643 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.63□□□□□ -1.67
LTBQ06643 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LTBQ06643 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
LTBQ06643 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LTBQ06643 AC008549.2-201ENST00000333482 706 ntBASIC4.62□□□□□ -1.67
LTBQ06643 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.62□□□□□ -1.67
LTBQ06643 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.62□□□□□ -1.67
LTBQ06643 AC007738.1-201ENST00000413892 348 ntBASIC4.62□□□□□ -1.67
LTBQ06643 DNAJC19P7-201ENST00000428811 344 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LTBQ06643 PTGES3P1-201ENST00000439531 483 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.62□□□□□ -1.67
LTBQ06643 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.62□□□□□ -1.67
LTBQ06643 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 AC069540.1-201ENST00000446320 988 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AC239367.2-201ENST00000447309 705 ntBASIC4.62□□□□□ -1.67
LTBQ06643 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.62□□□□□ -1.67
LTBQ06643 RPS6P2-201ENST00000454208 705 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LTBQ06643 NDUFA12P1-201ENST00000455914 406 ntBASIC4.62□□□□□ -1.67
LTBQ06643 snoU13.20-201ENST00000459180 104 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AC079203.1-201ENST00000487972 404 ntBASIC4.62□□□□□ -1.67
LTBQ06643 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.62□□□□□ -1.67
LTBQ06643 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.62□□□□□ -1.67
LTBQ06643 AC034244.1-201ENST00000507687 207 ntBASIC4.62□□□□□ -1.67
LTBQ06643 GTF2F2P1-201ENST00000511083 675 ntBASIC4.62□□□□□ -1.67
LTBQ06643 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.62□□□□□ -1.67
LTBQ06643 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.62□□□□□ -1.67
LTBQ06643 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.62□□□□□ -1.67
LTBQ06643 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.62□□□□□ -1.67
LTBQ06643 AC134698.5-201ENST00000519444 336 ntBASIC4.62□□□□□ -1.67
LTBQ06643 C1GALT1P3-201ENST00000522049 819 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AC010306.1-201ENST00000523223 1117 ntBASIC4.62□□□□□ -1.67
LTBQ06643 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.62□□□□□ -1.67
LTBQ06643 GCSHP4-201ENST00000538792 439 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AC092490.3-201ENST00000545370 572 ntBASIC4.62□□□□□ -1.67
LTBQ06643 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 AL049830.4-201ENST00000555149 351 ntBASIC4.62□□□□□ -1.67
LTBQ06643 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.62□□□□□ -1.67
LTBQ06643 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 AC023813.2-201ENST00000564321 469 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.62□□□□□ -1.67
LTBQ06643 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.62□□□□□ -1.67
LTBQ06643 BNIP3P22-201ENST00000593399 556 ntBASIC4.62□□□□□ -1.67
LTBQ06643 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.62□□□□□ -1.67
LTBQ06643 SUMO2P14-201ENST00000604488 293 ntBASIC4.62□□□□□ -1.67
LTBQ06643 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.62□□□□□ -1.67
LTBQ06643 AC083809.1-201ENST00000615051 472 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AL158062.1-201ENST00000619632 745 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.62□□□□□ -1.67
LTBQ06643 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.62□□□□□ -1.67
LTBQ06643 AC139713.2-210ENST00000641741 992 ntBASIC4.62□□□□□ -1.67
LTBQ06643 AC000374.1-201ENST00000434698 1745 ntBASIC4.62□□□□□ -1.67
LTBQ06643 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LTBQ06643 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LTBQ06643 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LTBQ06643 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.62□□□□□ -1.67
LTBQ06643 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.62□□□□□ -1.67
LTBQ06643 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.62□□□□□ -1.67
LTBQ06643 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.61□□□□□ -1.67
LTBQ06643 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 AC063976.2-201ENST00000425667 3556 ntBASIC4.61□□□□□ -1.67
LTBQ06643 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 RPL32P3-201ENST00000359025 275 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms