Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
YBX1P67809 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 SELENOWP1-201ENST00000322792 252 ntBASIC5.74□□□□□ -1.49
YBX1P67809 Y_RNA.509-201ENST00000384506 99 ntBASIC5.74□□□□□ -1.49
YBX1P67809 RNU6-244P-201ENST00000391028 104 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.74□□□□□ -1.49
YBX1P67809 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.74□□□□□ -1.49
YBX1P67809 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.74□□□□□ -1.49
YBX1P67809 ZYG11AP1-201ENST00000430329 837 ntBASIC5.74□□□□□ -1.49
YBX1P67809 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AL450263.2-201ENST00000439400 589 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AL022238.1-201ENST00000442557 355 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 AC239798.3-201ENST00000454459 408 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC104164.1-201ENST00000460282 590 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.74□□□□□ -1.49
YBX1P67809 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.74□□□□□ -1.49
YBX1P67809 MTCYBP18-201ENST00000501056 747 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.74□□□□□ -1.49
YBX1P67809 AC097173.1-201ENST00000505862 819 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC117522.3-201ENST00000507974 584 ntBASIC5.74□□□□□ -1.49
YBX1P67809 DUTP7-201ENST00000507982 486 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.74□□□□□ -1.49
YBX1P67809 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.74□□□□□ -1.49
YBX1P67809 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.74□□□□□ -1.49
YBX1P67809 OR5AQ1P-201ENST00000527596 927 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.74□□□□□ -1.49
YBX1P67809 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.74□□□□□ -1.49
YBX1P67809 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 AC137768.1-201ENST00000549998 553 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC007956.1-201ENST00000555623 542 ntBASIC5.74□□□□□ -1.49
YBX1P67809 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.74□□□□□ -1.49
YBX1P67809 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.74□□□□□ -1.49
YBX1P67809 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.74□□□□□ -1.49
YBX1P67809 AC025857.2-201ENST00000602711 238 ntBASIC5.74□□□□□ -1.49
YBX1P67809 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 AC027807.2-201ENST00000616099 408 ntBASIC5.74□□□□□ -1.49
YBX1P67809 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 FRG1KP-201ENST00000623592 341 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
YBX1P67809 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 SPATA2P1-201ENST00000431223 2055 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.74□□□□□ -1.49
YBX1P67809 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
YBX1P67809 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
YBX1P67809 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.73□□□□□ -1.49
YBX1P67809 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.73□□□□□ -1.49
YBX1P67809 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 AC091305.2-201ENST00000624049 1576 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.73□□□□□ -1.49
YBX1P67809 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 RNU5D-1-201ENST00000363299 116 ntBASIC5.73□□□□□ -1.49
YBX1P67809 SNORD1C-201ENST00000363315 78 ntBASIC5.73□□□□□ -1.49
YBX1P67809 Y_RNA.402-201ENST00000383972 102 ntBASIC5.73□□□□□ -1.49
YBX1P67809 RNU6-452P-201ENST00000384406 107 ntBASIC5.73□□□□□ -1.49
YBX1P67809 RNU6-1263P-201ENST00000384601 106 ntBASIC5.73□□□□□ -1.49
YBX1P67809 Y_RNA.573-201ENST00000384763 105 ntBASIC5.73□□□□□ -1.49
YBX1P67809 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
YBX1P67809 AL034403.1-201ENST00000399414 885 ntBASIC5.73□□□□□ -1.49
YBX1P67809 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.73□□□□□ -1.49
YBX1P67809 AC092745.2-202ENST00000411880 369 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.73□□□□□ -1.49
YBX1P67809 USP9YP13-201ENST00000417797 480 ntBASIC5.73□□□□□ -1.49
YBX1P67809 RPL21P111-201ENST00000418453 477 ntBASIC5.73□□□□□ -1.49
YBX1P67809 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 AL389915.1-201ENST00000422463 466 ntBASIC5.73□□□□□ -1.49
YBX1P67809 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
YBX1P67809 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.73□□□□□ -1.49
YBX1P67809 ATP5HP2-201ENST00000433885 485 ntBASIC5.73□□□□□ -1.49
YBX1P67809 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.73□□□□□ -1.49
YBX1P67809 KRT8P51-201ENST00000438938 274 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AL831737.1-201ENST00000441288 271 ntBASIC5.73□□□□□ -1.49
YBX1P67809 AC015983.1-201ENST00000441577 373 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms