Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 MIR3939-201ENST00000582614 106 ntBASIC4.73□□□□□ -1.65
ATXN3P54252 MIR548Y-201ENST00000582739 110 ntBASIC4.73□□□□□ -1.65
ATXN3P54252 BNIP3P22-201ENST00000593399 556 ntBASIC4.73□□□□□ -1.65
ATXN3P54252 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.73□□□□□ -1.65
ATXN3P54252 BX322635.1-201ENST00000605804 496 ntBASIC4.73□□□□□ -1.65
ATXN3P54252 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.73□□□□□ -1.65
ATXN3P54252 AC091979.2-201ENST00000607514 214 ntBASIC4.73□□□□□ -1.65
ATXN3P54252 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATXN3P54252 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATXN3P54252 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATXN3P54252 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATXN3P54252 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATXN3P54252 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
ATXN3P54252 AL442639.1-201ENST00000625030 1899 ntBASIC4.73□□□□□ -1.65
ATXN3P54252 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ATXN3P54252 DDX6P1-205ENST00000441966 1436 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 OR56B2P-202ENST00000641377 2453 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
ATXN3P54252 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
ATXN3P54252 AC092435.4-201ENST00000623012 4159 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 AC008549.2-201ENST00000333482 706 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 RNA5SP509-201ENST00000364577 119 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 MIR23B-201ENST00000384832 97 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.72□□□□□ -1.65
ATXN3P54252 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.72□□□□□ -1.65
ATXN3P54252 RN7SKP199-201ENST00000410325 305 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 RN7SKP267-201ENST00000410381 285 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.72□□□□□ -1.65
ATXN3P54252 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.72□□□□□ -1.65
ATXN3P54252 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.72□□□□□ -1.65
ATXN3P54252 RPS24P8-201ENST00000431490 402 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.72□□□□□ -1.65
ATXN3P54252 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.72□□□□□ -1.65
ATXN3P54252 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.72□□□□□ -1.65
ATXN3P54252 AL450023.3-201ENST00000440592 271 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.72□□□□□ -1.65
ATXN3P54252 CDC27P1-201ENST00000445384 715 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 RPL34P26-201ENST00000445636 354 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.72□□□□□ -1.65
ATXN3P54252 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.72□□□□□ -1.65
ATXN3P54252 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
ATXN3P54252 NIP7P2-201ENST00000485801 544 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
ATXN3P54252 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.72□□□□□ -1.65
ATXN3P54252 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ATXN3P54252 AC007016.1-201ENST00000512110 244 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 MTCO1P35-201ENST00000515270 228 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.72□□□□□ -1.65
ATXN3P54252 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.72□□□□□ -1.65
ATXN3P54252 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.72□□□□□ -1.65
ATXN3P54252 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.72□□□□□ -1.65
ATXN3P54252 PDCD5P1-201ENST00000543528 309 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.72□□□□□ -1.65
ATXN3P54252 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.72□□□□□ -1.65
ATXN3P54252 MIR4716-201ENST00000579628 84 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 VN1R84P-201ENST00000593697 235 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 RNF138P2-201ENST00000603490 592 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AL121932.1-201ENST00000605542 214 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AL008729.2-201ENST00000606393 473 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AC010424.2-201ENST00000607594 443 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 OR7A19P-201ENST00000608051 733 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AC055764.2-201ENST00000610089 670 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AC243654.2-201ENST00000612843 443 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AC123768.4-201ENST00000616244 701 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 AC015804.1-201ENST00000622935 435 ntBASIC4.72□□□□□ -1.65
ATXN3P54252 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.72□□□□□ -1.65
ATXN3P54252 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.72□□□□□ -1.65
ATXN3P54252 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.72□□□□□ -1.65
ATXN3P54252 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.72□□□□□ -1.65
ATXN3P54252 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ATXN3P54252 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATXN3P54252 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
ATXN3P54252 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
ATXN3P54252 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ATXN3P54252 CASC19-204ENST00000641001 2055 ntBASIC4.71□□□□□ -1.65
ATXN3P54252 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.71□□□□□ -1.66
ATXN3P54252 AC025031.4-201ENST00000621248 3271 ntBASIC4.71□□□□□ -1.66
ATXN3P54252 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATXN3P54252 SNORA73.1-201ENST00000363107 205 ntBASIC4.71□□□□□ -1.66
ATXN3P54252 RNU1-64P-201ENST00000365443 163 ntBASIC4.71□□□□□ -1.66
ATXN3P54252 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATXN3P54252 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATXN3P54252 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
ATXN3P54252 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.71□□□□□ -1.66
ATXN3P54252 GAPDHP49-201ENST00000421421 961 ntBASIC4.71□□□□□ -1.66
ATXN3P54252 RPEP3-201ENST00000425462 676 ntBASIC4.71□□□□□ -1.66
ATXN3P54252 RPS27AP12-201ENST00000429552 465 ntBASIC4.71□□□□□ -1.66
ATXN3P54252 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.71□□□□□ -1.66
ATXN3P54252 MTCO1P52-201ENST00000433928 531 ntBASIC4.71□□□□□ -1.66
ATXN3P54252 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms