Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 YWHAZP2-201ENST00000440317 728 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 TXNP5-201ENST00000441043 315 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.84□□□□□ -1.63
LIMK1P53667 EEF1A1P1-201ENST00000447052 739 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.84□□□□□ -1.63
LIMK1P53667 HMGB1P26-201ENST00000452520 628 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 RPL7P32-201ENST00000457119 744 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK1P53667 SCARNA22-201ENST00000503991 125 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK1P53667 AC022790.1-201ENST00000522872 204 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.84□□□□□ -1.63
LIMK1P53667 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK1P53667 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.84□□□□□ -1.63
LIMK1P53667 DEFB109D-201ENST00000529497 240 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.84□□□□□ -1.63
LIMK1P53667 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.84□□□□□ -1.63
LIMK1P53667 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK1P53667 AC006349.1-201ENST00000555526 235 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 AC106785.1-201ENST00000565935 262 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.84□□□□□ -1.63
LIMK1P53667 OR6R2P-201ENST00000609216 300 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 AP001033.2-201ENST00000609701 1003 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.84□□□□□ -1.63
LIMK1P53667 AC015914.2-201ENST00000618167 288 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 AC015871.5-202ENST00000623252 701 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 AC116563.2-201ENST00000624751 535 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK1P53667 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.84□□□□□ -1.63
LIMK1P53667 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
LIMK1P53667 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LIMK1P53667 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LIMK1P53667 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.84□□□□□ -1.64
LIMK1P53667 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LIMK1P53667 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.84□□□□□ -1.64
LIMK1P53667 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
LIMK1P53667 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.84□□□□□ -1.64
LIMK1P53667 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 AL031119.1-201ENST00000404707 1879 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK1P53667 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK1P53667 CCT8P1-201ENST00000413611 1657 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.83□□□□□ -1.64
LIMK1P53667 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LIMK1P53667 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 MIR16-2-201ENST00000362117 81 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 RNA5SP397-201ENST00000391323 118 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 RNU4-74P-201ENST00000411280 161 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 AC010385.1-201ENST00000412374 256 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 RSU1P3-201ENST00000412878 835 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK1P53667 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.83□□□□□ -1.64
LIMK1P53667 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK1P53667 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK1P53667 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK1P53667 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK1P53667 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK1P53667 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK1P53667 CYCSP24-201ENST00000445119 316 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK1P53667 RN7SL814P-201ENST00000487715 300 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK1P53667 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.83□□□□□ -1.64
LIMK1P53667 AC138938.1-201ENST00000515431 782 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 MIR2116-201ENST00000517221 80 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK1P53667 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK1P53667 CIR1P1-201ENST00000524055 1133 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK1P53667 MIR3939-201ENST00000582614 106 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 MIR548Y-201ENST00000582739 110 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 AC005776.1-201ENST00000603164 290 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK1P53667 AL355816.1-201ENST00000607951 118 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.83□□□□□ -1.64
LIMK1P53667 AL035461.2-201ENST00000619201 524 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 AC097460.3-201ENST00000623099 442 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK1P53667 NEAT1-202ENST00000501122 22743 ntBASIC4.83□□□□□ -1.64
LIMK1P53667 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
LIMK1P53667 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LIMK1P53667 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK1P53667 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK1P53667 NCLP2-201ENST00000416078 1462 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.82□□□□□ -1.64
LIMK1P53667 AL133268.1-201ENST00000405676 1401 ntBASIC4.82□□□□□ -1.64
LIMK1P53667 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms