Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.3□□□□□ -1.56
COPB1P53618 RPS26P2-201ENST00000440331 348 ntBASIC5.3□□□□□ -1.56
COPB1P53618 MTCYBP12-201ENST00000440559 1134 ntBASIC5.3□□□□□ -1.56
COPB1P53618 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.3□□□□□ -1.56
COPB1P53618 CEACAMP7-201ENST00000444105 496 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AL589880.1-201ENST00000448271 287 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC112492.1-201ENST00000449607 712 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC079841.1-201ENST00000481228 950 ntBASIC5.3□□□□□ -1.56
COPB1P53618 SNRPCP2-201ENST00000504370 475 ntBASIC5.3□□□□□ -1.56
COPB1P53618 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.3□□□□□ -1.56
COPB1P53618 MRPS33P2-201ENST00000507850 322 ntBASIC5.3□□□□□ -1.56
COPB1P53618 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.3□□□□□ -1.56
COPB1P53618 LRRC6P1-201ENST00000532188 885 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC023050.2-201ENST00000544968 387 ntBASIC5.3□□□□□ -1.56
COPB1P53618 FKBP1BP1-201ENST00000553366 325 ntBASIC5.3□□□□□ -1.56
COPB1P53618 DUXAP6-201ENST00000553858 601 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AL390334.1-201ENST00000556395 450 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC009094.1-201ENST00000564443 426 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC093249.4-201ENST00000564755 259 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.3□□□□□ -1.56
COPB1P53618 MIR4691-201ENST00000583764 85 ntBASIC5.3□□□□□ -1.56
COPB1P53618 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.3□□□□□ -1.56
COPB1P53618 AC021171.1-201ENST00000603137 706 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AL139344.1-201ENST00000605228 195 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC080013.6-201ENST00000606185 215 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC012557.1-201ENST00000607115 611 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC010424.2-201ENST00000607594 443 ntBASIC5.3□□□□□ -1.56
COPB1P53618 OR2BH1P-201ENST00000608850 864 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC019131.2-201ENST00000609071 870 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AL138478.1-201ENST00000612252 832 ntBASIC5.3□□□□□ -1.56
COPB1P53618 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AL121890.3-201ENST00000618494 516 ntBASIC5.3□□□□□ -1.56
COPB1P53618 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.3□□□□□ -1.56
COPB1P53618 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.3□□□□□ -1.56
COPB1P53618 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.3□□□□□ -1.56
COPB1P53618 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.3□□□□□ -1.56
COPB1P53618 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COPB1P53618 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COPB1P53618 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.3□□□□□ -1.56
COPB1P53618 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.3□□□□□ -1.56
COPB1P53618 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COPB1P53618 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COPB1P53618 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.29□□□□□ -1.56
COPB1P53618 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COPB1P53618 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.29□□□□□ -1.56
COPB1P53618 AP000542.2-201ENST00000623199 6179 ntBASIC5.29□□□□□ -1.56
COPB1P53618 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPB1P53618 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COPB1P53618 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPB1P53618 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPB1P53618 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPB1P53618 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COPB1P53618 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.29□□□□□ -1.56
COPB1P53618 SNORD116-8-201ENST00000384365 95 ntBASIC5.29□□□□□ -1.56
COPB1P53618 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COPB1P53618 AC233289.1-201ENST00000403700 508 ntBASIC5.29□□□□□ -1.56
COPB1P53618 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.29□□□□□ -1.56
COPB1P53618 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.29□□□□□ -1.56
COPB1P53618 HMGB1P49-201ENST00000418882 569 ntBASIC5.29□□□□□ -1.56
COPB1P53618 RPS3AP37-201ENST00000419176 745 ntBASIC5.29□□□□□ -1.56
COPB1P53618 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.29□□□□□ -1.56
COPB1P53618 AL451139.1-201ENST00000434718 346 ntBASIC5.29□□□□□ -1.56
COPB1P53618 HSFY3P-201ENST00000444242 1191 ntBASIC5.29□□□□□ -1.56
COPB1P53618 AL137845.2-201ENST00000444292 988 ntBASIC5.29□□□□□ -1.56
COPB1P53618 AURKAPS1-201ENST00000451805 1212 ntBASIC5.29□□□□□ -1.56
COPB1P53618 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.29□□□□□ -1.56
COPB1P53618 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.29□□□□□ -1.56
COPB1P53618 RN7SL222P-201ENST00000476452 299 ntBASIC5.29□□□□□ -1.56
COPB1P53618 BX284632.1-201ENST00000478218 541 ntBASIC5.29□□□□□ -1.56
COPB1P53618 RN7SL826P-201ENST00000479724 288 ntBASIC5.29□□□□□ -1.56
COPB1P53618 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COPB1P53618 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
COPB1P53618 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.29□□□□□ -1.56
COPB1P53618 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COPB1P53618 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.29□□□□□ -1.56
COPB1P53618 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPB1P53618 ZNF321P-202ENST00000550843 495 ntBASIC5.29□□□□□ -1.56
COPB1P53618 AC011611.5-201ENST00000552477 578 ntBASIC5.29□□□□□ -1.56
COPB1P53618 AC079075.1-201ENST00000559543 878 ntBASIC5.29□□□□□ -1.56
COPB1P53618 AGGF1P6-201ENST00000569213 976 ntBASIC5.29□□□□□ -1.56
COPB1P53618 AC061975.8-201ENST00000587058 721 ntBASIC5.29□□□□□ -1.56
COPB1P53618 ZNF92P3-201ENST00000596594 954 ntBASIC5.29□□□□□ -1.56
COPB1P53618 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.29□□□□□ -1.56
COPB1P53618 MEMO1P5-201ENST00000604810 406 ntBASIC5.29□□□□□ -1.56
COPB1P53618 AC011374.2-201ENST00000607135 526 ntBASIC5.29□□□□□ -1.56
COPB1P53618 SNORD91B-202ENST00000608459 222 ntBASIC5.29□□□□□ -1.56
COPB1P53618 AC097505.1-201ENST00000610199 565 ntBASIC5.29□□□□□ -1.56
COPB1P53618 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.29□□□□□ -1.56
COPB1P53618 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.29□□□□□ -1.56
COPB1P53618 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.29□□□□□ -1.56
COPB1P53618 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.29□□□□□ -1.56
COPB1P53618 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COPB1P53618 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COPB1P53618 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.29□□□□□ -1.56
COPB1P53618 ZNF733P-202ENST00000444809 1573 ntBASIC5.29□□□□□ -1.56
COPB1P53618 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COPB1P53618 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COPB1P53618 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
COPB1P53618 SMG1P6-201ENST00000532337 2930 ntBASIC5.28□□□□□ -1.56
COPB1P53618 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms