Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.59□□□□□ -1.35
USP11P51784 AC012557.1-201ENST00000607115 611 ntBASIC6.59□□□□□ -1.35
USP11P51784 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.59□□□□□ -1.35
USP11P51784 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.59□□□□□ -1.35
USP11P51784 AC055764.2-201ENST00000610089 670 ntBASIC6.59□□□□□ -1.35
USP11P51784 AC005962.2-201ENST00000611427 652 ntBASIC6.59□□□□□ -1.35
USP11P51784 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.59□□□□□ -1.35
USP11P51784 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
USP11P51784 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
USP11P51784 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.59□□□□□ -1.35
USP11P51784 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USP11P51784 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.59□□□□□ -1.35
USP11P51784 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USP11P51784 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USP11P51784 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.36
USP11P51784 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.59□□□□□ -1.36
USP11P51784 OR13C1P-202ENST00000641378 2919 ntBASIC6.59□□□□□ -1.36
USP11P51784 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
USP11P51784 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
USP11P51784 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.59□□□□□ -1.36
USP11P51784 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.58□□□□□ -1.36
USP11P51784 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
USP11P51784 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 AC091305.2-201ENST00000624049 1576 ntBASIC6.58□□□□□ -1.36
USP11P51784 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.58□□□□□ -1.36
USP11P51784 MFSD8-219ENST00000641228 2559 ntBASIC6.58□□□□□ -1.36
USP11P51784 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 RNU6-543P-201ENST00000362576 108 ntBASIC6.58□□□□□ -1.36
USP11P51784 RNY4P14-201ENST00000363656 96 ntBASIC6.58□□□□□ -1.36
USP11P51784 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
USP11P51784 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
USP11P51784 FCF1P10-201ENST00000407590 479 ntBASIC6.58□□□□□ -1.36
USP11P51784 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.58□□□□□ -1.36
USP11P51784 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.58□□□□□ -1.36
USP11P51784 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.58□□□□□ -1.36
USP11P51784 PTP4A1P1-201ENST00000420539 515 ntBASIC6.58□□□□□ -1.36
USP11P51784 AL513174.1-201ENST00000423182 629 ntBASIC6.58□□□□□ -1.36
USP11P51784 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.58□□□□□ -1.36
USP11P51784 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.58□□□□□ -1.36
USP11P51784 GAPDHP48-201ENST00000436626 961 ntBASIC6.58□□□□□ -1.36
USP11P51784 OR7E125P-201ENST00000443450 846 ntBASIC6.58□□□□□ -1.36
USP11P51784 AC023512.1-201ENST00000444513 499 ntBASIC6.58□□□□□ -1.36
USP11P51784 AC073109.1-201ENST00000445066 978 ntBASIC6.58□□□□□ -1.36
USP11P51784 PSPHP1-201ENST00000450062 261 ntBASIC6.58□□□□□ -1.36
USP11P51784 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.58□□□□□ -1.36
USP11P51784 AC004129.2-201ENST00000457229 287 ntBASIC6.58□□□□□ -1.36
USP11P51784 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.58□□□□□ -1.36
USP11P51784 AC007998.1-201ENST00000474156 672 ntBASIC6.58□□□□□ -1.36
USP11P51784 RN7SL570P-201ENST00000484405 292 ntBASIC6.58□□□□□ -1.36
USP11P51784 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 MTCO3P9-201ENST00000506989 781 ntBASIC6.58□□□□□ -1.36
USP11P51784 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.58□□□□□ -1.36
USP11P51784 AC021678.3-201ENST00000517893 476 ntBASIC6.58□□□□□ -1.36
USP11P51784 AC139365.2-201ENST00000517972 253 ntBASIC6.58□□□□□ -1.36
USP11P51784 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.58□□□□□ -1.36
USP11P51784 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
USP11P51784 AP002453.2-201ENST00000533503 320 ntBASIC6.58□□□□□ -1.36
USP11P51784 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.58□□□□□ -1.36
USP11P51784 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
USP11P51784 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.58□□□□□ -1.36
USP11P51784 AC096996.1-201ENST00000563813 325 ntBASIC6.58□□□□□ -1.36
USP11P51784 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.58□□□□□ -1.36
USP11P51784 MIR4420-201ENST00000583944 77 ntBASIC6.58□□□□□ -1.36
USP11P51784 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 AC063977.5-201ENST00000601044 974 ntBASIC6.58□□□□□ -1.36
USP11P51784 RN7SL544P-201ENST00000617232 284 ntBASIC6.58□□□□□ -1.36
USP11P51784 AP005431.1-201ENST00000618479 319 ntBASIC6.58□□□□□ -1.36
USP11P51784 AL158209.2-201ENST00000619266 216 ntBASIC6.58□□□□□ -1.36
USP11P51784 RN7SL763P-201ENST00000620922 284 ntBASIC6.58□□□□□ -1.36
USP11P51784 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
USP11P51784 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
USP11P51784 MFSD8-239ENST00000641590 2479 ntBASIC6.58□□□□□ -1.36
USP11P51784 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.58□□□□□ -1.36
USP11P51784 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
USP11P51784 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.58□□□□□ -1.36
USP11P51784 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.57□□□□□ -1.36
USP11P51784 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.57□□□□□ -1.36
USP11P51784 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USP11P51784 MTCO1P23-201ENST00000415223 1526 ntBASIC6.57□□□□□ -1.36
USP11P51784 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USP11P51784 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USP11P51784 AC015689.2-201ENST00000528172 1738 ntBASIC6.57□□□□□ -1.36
USP11P51784 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USP11P51784 RNA5SP435-201ENST00000364044 108 ntBASIC6.57□□□□□ -1.36
USP11P51784 MT-TD-201ENST00000387419 68 ntBASIC6.57□□□□□ -1.36
USP11P51784 AC007066.1-201ENST00000392902 381 ntBASIC6.57□□□□□ -1.36
USP11P51784 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.57□□□□□ -1.36
USP11P51784 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.57□□□□□ -1.36
USP11P51784 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.57□□□□□ -1.36
USP11P51784 CRIP1P1-201ENST00000427567 185 ntBASIC6.57□□□□□ -1.36
USP11P51784 MTND4LP10-201ENST00000435146 291 ntBASIC6.57□□□□□ -1.36
USP11P51784 AL022238.1-201ENST00000442557 355 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms