Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SRP9P49458 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SRP9P49458 MIR1911-201ENST00000410783 80 ntBASIC3.8□□□□□ -1.8
SRP9P49458 RPL26P29-201ENST00000415623 438 ntBASIC3.8□□□□□ -1.8
SRP9P49458 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.8□□□□□ -1.8
SRP9P49458 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.8□□□□□ -1.8
SRP9P49458 AC009480.2-201ENST00000422916 432 ntBASIC3.8□□□□□ -1.8
SRP9P49458 NPM1P26-201ENST00000426339 738 ntBASIC3.8□□□□□ -1.8
SRP9P49458 AP001324.1-201ENST00000428553 399 ntBASIC3.8□□□□□ -1.8
SRP9P49458 RPL23AP1-201ENST00000428990 471 ntBASIC3.8□□□□□ -1.8
SRP9P49458 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.8□□□□□ -1.8
SRP9P49458 AC068287.1-201ENST00000430283 295 ntBASIC3.8□□□□□ -1.8
SRP9P49458 RPL23AP43-201ENST00000446445 471 ntBASIC3.8□□□□□ -1.8
SRP9P49458 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.8□□□□□ -1.8
SRP9P49458 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.8□□□□□ -1.8
SRP9P49458 RN7SL812P-201ENST00000493791 279 ntBASIC3.8□□□□□ -1.8
SRP9P49458 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.8□□□□□ -1.8
SRP9P49458 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.8□□□□□ -1.8
SRP9P49458 AC017037.1-201ENST00000508460 471 ntBASIC3.8□□□□□ -1.8
SRP9P49458 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.8□□□□□ -1.8
SRP9P49458 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.8□□□□□ -1.8
SRP9P49458 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.8□□□□□ -1.8
SRP9P49458 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.8□□□□□ -1.8
SRP9P49458 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.8□□□□□ -1.8
SRP9P49458 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.8□□□□□ -1.8
SRP9P49458 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.8□□□□□ -1.8
SRP9P49458 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.8□□□□□ -1.8
SRP9P49458 AC092851.1-201ENST00000535964 478 ntBASIC3.8□□□□□ -1.8
SRP9P49458 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.8□□□□□ -1.8
SRP9P49458 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.8□□□□□ -1.8
SRP9P49458 AC005034.4-201ENST00000603612 899 ntBASIC3.8□□□□□ -1.8
SRP9P49458 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.8□□□□□ -1.8
SRP9P49458 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
SRP9P49458 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SRP9P49458 AL132640.2-201ENST00000559968 1698 ntBASIC3.8□□□□□ -1.8
SRP9P49458 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SRP9P49458 RAD17P1-201ENST00000418130 2042 ntBASIC3.8□□□□□ -1.8
SRP9P49458 AC097504.1-201ENST00000515103 2415 ntBASIC3.8□□□□□ -1.8
SRP9P49458 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SRP9P49458 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SRP9P49458 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SRP9P49458 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SRP9P49458 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SRP9P49458 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.79□□□□□ -1.8
SRP9P49458 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SRP9P49458 RNU6-146P-201ENST00000384602 108 ntBASIC3.79□□□□□ -1.8
SRP9P49458 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SRP9P49458 AL138878.1-201ENST00000405131 347 ntBASIC3.79□□□□□ -1.8
SRP9P49458 ZNF603P-201ENST00000405613 487 ntBASIC3.79□□□□□ -1.8
SRP9P49458 AC092647.1-201ENST00000420654 287 ntBASIC3.79□□□□□ -1.8
SRP9P49458 AL356387.2-201ENST00000422272 243 ntBASIC3.79□□□□□ -1.8
SRP9P49458 RPL7AP25-201ENST00000423357 805 ntBASIC3.79□□□□□ -1.8
SRP9P49458 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.79□□□□□ -1.8
SRP9P49458 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.79□□□□□ -1.8
SRP9P49458 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.79□□□□□ -1.8
SRP9P49458 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.79□□□□□ -1.8
SRP9P49458 AL035551.1-201ENST00000446931 348 ntBASIC3.79□□□□□ -1.8
SRP9P49458 ABCF2P2-201ENST00000450549 296 ntBASIC3.79□□□□□ -1.8
SRP9P49458 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.79□□□□□ -1.8
SRP9P49458 Z95152.1-201ENST00000453556 656 ntBASIC3.79□□□□□ -1.8
SRP9P49458 RPS29P33-201ENST00000456717 146 ntBASIC3.79□□□□□ -1.8
SRP9P49458 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.79□□□□□ -1.8
SRP9P49458 RPL21P126-201ENST00000470049 478 ntBASIC3.79□□□□□ -1.8
SRP9P49458 RN7SL585P-201ENST00000470538 280 ntBASIC3.79□□□□□ -1.8
SRP9P49458 SYT14P1-201ENST00000481459 721 ntBASIC3.79□□□□□ -1.8
SRP9P49458 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SRP9P49458 IGKV2D-23-201ENST00000518179 286 ntBASIC3.79□□□□□ -1.8
SRP9P49458 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.79□□□□□ -1.8
SRP9P49458 AC115286.1-201ENST00000604298 434 ntBASIC3.79□□□□□ -1.8
SRP9P49458 AC012409.3-201ENST00000611343 981 ntBASIC3.79□□□□□ -1.8
SRP9P49458 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.79□□□□□ -1.8
SRP9P49458 AL359715.5-201ENST00000623431 443 ntBASIC3.79□□□□□ -1.8
SRP9P49458 AC019278.1-201ENST00000623516 479 ntBASIC3.79□□□□□ -1.8
SRP9P49458 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.79□□□□□ -1.8
SRP9P49458 AC009452.1-201ENST00000640823 606 ntBASIC3.79□□□□□ -1.8
SRP9P49458 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SRP9P49458 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SRP9P49458 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SRP9P49458 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SRP9P49458 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.79□□□□□ -1.8
SRP9P49458 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SRP9P49458 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SRP9P49458 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRP9P49458 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRP9P49458 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SRP9P49458 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRP9P49458 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SRP9P49458 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRP9P49458 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRP9P49458 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.78□□□□□ -1.8
SRP9P49458 AL137100.1-201ENST00000556703 1620 ntBASIC3.78□□□□□ -1.8
SRP9P49458 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SRP9P49458 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SRP9P49458 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SRP9P49458 AC007685.1-201ENST00000329806 452 ntBASIC3.78□□□□□ -1.8
SRP9P49458 MIR659-201ENST00000384963 97 ntBASIC3.78□□□□□ -1.8
SRP9P49458 SNORA74C-2-201ENST00000411179 201 ntBASIC3.78□□□□□ -1.8
SRP9P49458 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.78□□□□□ -1.8
SRP9P49458 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.78□□□□□ -1.8
SRP9P49458 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms