Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 ZNF971P-201ENST00000562068 1249 ntBASIC4.14□□□□□ -1.75
CDX1P47902 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.14□□□□□ -1.75
CDX1P47902 AC009163.6-201ENST00000612367 342 ntBASIC4.14□□□□□ -1.75
CDX1P47902 AC009704.2-201ENST00000618739 483 ntBASIC4.14□□□□□ -1.75
CDX1P47902 AP003400.3-201ENST00000624904 346 ntBASIC4.14□□□□□ -1.75
CDX1P47902 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.14□□□□□ -1.75
CDX1P47902 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDX1P47902 BX649567.1-201ENST00000642071 1134 ntBASIC4.14□□□□□ -1.75
CDX1P47902 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.14□□□□□ -1.75
CDX1P47902 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 AC025263.3-201ENST00000622965 1396 ntBASIC4.14□□□□□ -1.75
CDX1P47902 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CDX1P47902 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
CDX1P47902 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.13□□□□□ -1.75
CDX1P47902 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 AC006210.2-201ENST00000367074 1545 ntBASIC4.13□□□□□ -1.75
CDX1P47902 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDX1P47902 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 SNORA17.1-201ENST00000362945 126 ntBASIC4.13□□□□□ -1.75
CDX1P47902 RNU1-87P-201ENST00000363727 170 ntBASIC4.13□□□□□ -1.75
CDX1P47902 RNU1-43P-201ENST00000365052 165 ntBASIC4.13□□□□□ -1.75
CDX1P47902 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 RNU6-925P-201ENST00000384629 104 ntBASIC4.13□□□□□ -1.75
CDX1P47902 MIR105-1-201ENST00000385222 81 ntBASIC4.13□□□□□ -1.75
CDX1P47902 RNU6-298P-201ENST00000390888 96 ntBASIC4.13□□□□□ -1.75
CDX1P47902 MCTS2P-201ENST00000394552 546 ntBASIC4.13□□□□□ -1.75
CDX1P47902 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 PRRC2CP1-201ENST00000404428 159 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.13□□□□□ -1.75
CDX1P47902 AC073136.2-201ENST00000417282 849 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.13□□□□□ -1.75
CDX1P47902 AC007394.1-201ENST00000421941 531 ntBASIC4.13□□□□□ -1.75
CDX1P47902 IPMKP1-201ENST00000425988 855 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AL009174.1-201ENST00000426577 416 ntBASIC4.13□□□□□ -1.75
CDX1P47902 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.13□□□□□ -1.75
CDX1P47902 AC005033.1-201ENST00000428904 813 ntBASIC4.13□□□□□ -1.75
CDX1P47902 LYPLA1P1-201ENST00000434514 622 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.13□□□□□ -1.75
CDX1P47902 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.13□□□□□ -1.75
CDX1P47902 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.13□□□□□ -1.75
CDX1P47902 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AL389915.2-201ENST00000454576 441 ntBASIC4.13□□□□□ -1.75
CDX1P47902 FGF7P3-201ENST00000454645 303 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AC005532.2-201ENST00000467154 373 ntBASIC4.13□□□□□ -1.75
CDX1P47902 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.13□□□□□ -1.75
CDX1P47902 RN7SL222P-201ENST00000476452 299 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AC022133.1-201ENST00000490961 571 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AC110792.2-201ENST00000510278 224 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AC119751.1-201ENST00000513357 765 ntBASIC4.13□□□□□ -1.75
CDX1P47902 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.13□□□□□ -1.75
CDX1P47902 MORF4L1P3-201ENST00000525966 950 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.13□□□□□ -1.75
CDX1P47902 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.13□□□□□ -1.75
CDX1P47902 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.13□□□□□ -1.75
CDX1P47902 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 AC051619.2-201ENST00000559063 397 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.13□□□□□ -1.75
CDX1P47902 OR1AB1P-201ENST00000585564 761 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.13□□□□□ -1.75
CDX1P47902 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 AL391834.2-201ENST00000609982 546 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.13□□□□□ -1.75
CDX1P47902 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 AC018445.2-201ENST00000622987 260 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AP002505.2-201ENST00000623585 696 ntBASIC4.13□□□□□ -1.75
CDX1P47902 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.13□□□□□ -1.75
CDX1P47902 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDX1P47902 AL133243.3-201ENST00000617415 3004 ntBASIC4.13□□□□□ -1.75
CDX1P47902 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDX1P47902 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDX1P47902 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDX1P47902 RNA5SP507-201ENST00000363603 121 ntBASIC4.12□□□□□ -1.75
CDX1P47902 SNORA70-201ENST00000384436 135 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms