Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RORAP35398 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
RORAP35398 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RORAP35398 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
RORAP35398 RNU1-108P-201ENST00000362556 161 ntBASIC4.28□□□□□ -1.72
RORAP35398 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.28□□□□□ -1.72
RORAP35398 TRGV6-201ENST00000417928 299 ntBASIC4.28□□□□□ -1.72
RORAP35398 RAD23BP1-201ENST00000421404 1227 ntBASIC4.28□□□□□ -1.72
RORAP35398 AC007064.3-201ENST00000422608 359 ntBASIC4.28□□□□□ -1.72
RORAP35398 RPL21P43-201ENST00000425440 472 ntBASIC4.28□□□□□ -1.72
RORAP35398 RWDD4P2-201ENST00000426392 563 ntBASIC4.28□□□□□ -1.72
RORAP35398 AC073069.1-201ENST00000428657 441 ntBASIC4.28□□□□□ -1.72
RORAP35398 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.28□□□□□ -1.72
RORAP35398 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.28□□□□□ -1.72
RORAP35398 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.28□□□□□ -1.72
RORAP35398 CALM1P2-201ENST00000452941 448 ntBASIC4.28□□□□□ -1.72
RORAP35398 AC103987.1-201ENST00000473394 348 ntBASIC4.28□□□□□ -1.72
RORAP35398 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.28□□□□□ -1.72
RORAP35398 AC068587.1-201ENST00000483613 781 ntBASIC4.28□□□□□ -1.72
RORAP35398 RWDD4P1-201ENST00000488019 565 ntBASIC4.28□□□□□ -1.72
RORAP35398 PPM1AP1-201ENST00000502740 1135 ntBASIC4.28□□□□□ -1.72
RORAP35398 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.28□□□□□ -1.72
RORAP35398 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.28□□□□□ -1.72
RORAP35398 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.28□□□□□ -1.72
RORAP35398 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.28□□□□□ -1.72
RORAP35398 AC108471.1-201ENST00000513977 287 ntBASIC4.28□□□□□ -1.72
RORAP35398 IGLVIV-65-201ENST00000517313 360 ntBASIC4.28□□□□□ -1.72
RORAP35398 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.28□□□□□ -1.72
RORAP35398 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RORAP35398 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.28□□□□□ -1.72
RORAP35398 AC027281.1-201ENST00000574178 758 ntBASIC4.28□□□□□ -1.72
RORAP35398 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.28□□□□□ -1.72
RORAP35398 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.28□□□□□ -1.72
RORAP35398 AP001160.4-201ENST00000596971 382 ntBASIC4.28□□□□□ -1.72
RORAP35398 AC015813.4-201ENST00000610469 179 ntBASIC4.28□□□□□ -1.72
RORAP35398 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.28□□□□□ -1.72
RORAP35398 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.28□□□□□ -1.72
RORAP35398 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RORAP35398 AC012020.1-201ENST00000624541 1728 ntBASIC4.28□□□□□ -1.72
RORAP35398 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
RORAP35398 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.28□□□□□ -1.72
RORAP35398 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.28□□□□□ -1.72
RORAP35398 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RORAP35398 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.27□□□□□ -1.73
RORAP35398 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 LINC00622-201ENST00000562811 1570 ntBASIC4.27□□□□□ -1.73
RORAP35398 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.27□□□□□ -1.73
RORAP35398 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.27□□□□□ -1.73
RORAP35398 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RORAP35398 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RORAP35398 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RORAP35398 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.27□□□□□ -1.73
RORAP35398 RNU6-386P-201ENST00000362650 107 ntBASIC4.27□□□□□ -1.73
RORAP35398 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.27□□□□□ -1.73
RORAP35398 RNU6-1279P-201ENST00000383917 103 ntBASIC4.27□□□□□ -1.73
RORAP35398 AL356967.1-201ENST00000406305 431 ntBASIC4.27□□□□□ -1.73
RORAP35398 AC048351.1-201ENST00000420064 602 ntBASIC4.27□□□□□ -1.73
RORAP35398 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.27□□□□□ -1.73
RORAP35398 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.27□□□□□ -1.73
RORAP35398 RPL23AP43-201ENST00000446445 471 ntBASIC4.27□□□□□ -1.73
RORAP35398 AL672167.3-201ENST00000465951 960 ntBASIC4.27□□□□□ -1.73
RORAP35398 AC109327.1-201ENST00000471666 403 ntBASIC4.27□□□□□ -1.73
RORAP35398 RN7SL810P-201ENST00000493031 276 ntBASIC4.27□□□□□ -1.73
RORAP35398 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.27□□□□□ -1.73
RORAP35398 VWA8P1-201ENST00000510889 176 ntBASIC4.27□□□□□ -1.73
RORAP35398 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
RORAP35398 AC010476.1-201ENST00000519111 851 ntBASIC4.27□□□□□ -1.73
RORAP35398 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.27□□□□□ -1.73
RORAP35398 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.27□□□□□ -1.73
RORAP35398 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.27□□□□□ -1.73
RORAP35398 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.27□□□□□ -1.73
RORAP35398 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RORAP35398 ATP5J2P6-201ENST00000565203 266 ntBASIC4.27□□□□□ -1.73
RORAP35398 AC023575.1-201ENST00000580510 358 ntBASIC4.27□□□□□ -1.73
RORAP35398 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.27□□□□□ -1.73
RORAP35398 HMGB2P1-201ENST00000591146 634 ntBASIC4.27□□□□□ -1.73
RORAP35398 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 OR6R2P-201ENST00000609216 300 ntBASIC4.27□□□□□ -1.73
RORAP35398 MIR6716-201ENST00000613413 80 ntBASIC4.27□□□□□ -1.73
RORAP35398 AC234782.5-201ENST00000617723 324 ntBASIC4.27□□□□□ -1.73
RORAP35398 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RORAP35398 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.27□□□□□ -1.73
RORAP35398 LINC01808-202ENST00000641680 1116 ntBASIC4.27□□□□□ -1.73
RORAP35398 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.27□□□□□ -1.73
RORAP35398 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.27□□□□□ -1.73
RORAP35398 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.27□□□□□ -1.73
RORAP35398 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RORAP35398 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.26□□□□□ -1.73
RORAP35398 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RORAP35398 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RORAP35398 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RORAP35398 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms