Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC092747.2-201ENST00000545069 983 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 HMGN2P6-201ENST00000551091 273 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AC023161.2-201ENST00000551218 780 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC6A4P31645 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AL031985.2-201ENST00000600955 480 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AC009597.2-201ENST00000604659 592 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AC011626.1-201ENST00000604710 562 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AC072039.2-201ENST00000608883 439 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AP005137.2-201ENST00000609238 400 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AC098679.5-201ENST00000624394 571 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AC114947.2-201ENST00000565748 2125 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC6A4P31645 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 CASC19-284ENST00000642142 1868 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AC109446.4-201ENST00000623235 2755 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC6A4P31645 RLIMP2-201ENST00000427891 1563 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC6A4P31645 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC6A4P31645 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC6A4P31645 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
SLC6A4P31645 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC6A4P31645 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC6A4P31645 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC6A4P31645 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC6A4P31645 Y_RNA.505-201ENST00000384489 102 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AL645927.1-201ENST00000396783 406 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC211486.3-201ENST00000412694 621 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 GTF2IP23-201ENST00000423746 351 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 DPRXP1-201ENST00000426312 460 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.38□□□□□ -1.55
SLC6A4P31645 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC6A4P31645 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC6A4P31645 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC6A4P31645 HMGB1P16-201ENST00000447155 540 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC079776.3-201ENST00000450665 370 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 TPMTP4-201ENST00000450749 678 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC6A4P31645 MTCO2P18-201ENST00000457151 658 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 TRBV8-2-201ENST00000475637 270 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.38□□□□□ -1.55
SLC6A4P31645 MTCYBP37-201ENST00000510642 1133 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC109445.1-201ENST00000512356 383 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC108043.1-201ENST00000512696 574 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC006427.1-201ENST00000514359 712 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC6A4P31645 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 IGKV2D-10-201ENST00000520194 281 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 IGJP1-201ENST00000522682 475 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC6A4P31645 AP002373.2-201ENST00000541631 1060 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.38□□□□□ -1.55
SLC6A4P31645 NIFKP8-201ENST00000560500 874 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AL390726.5-202ENST00000564800 256 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC6A4P31645 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC6A4P31645 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC6A4P31645 MIR4999-201ENST00000585029 91 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC6A4P31645 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC6A4P31645 AC090525.3-201ENST00000605601 189 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AL022394.1-201ENST00000606979 292 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC6A4P31645 AL451074.6-201ENST00000608512 729 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC013562.2-201ENST00000611632 603 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AL353726.1-201ENST00000614041 1000 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC026585.1-201ENST00000619582 524 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC6A4P31645 AC006840.1-201ENST00000623069 542 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC099494.2-201ENST00000623371 978 ntBASIC5.38□□□□□ -1.55
SLC6A4P31645 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC6A4P31645 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC6A4P31645 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC6A4P31645 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC6A4P31645 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC6A4P31645 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC6A4P31645 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 AC046144.1-201ENST00000478559 1853 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 DDX18P4-201ENST00000511690 1966 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms