Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.08□□□□□ -1.44
CNGA1P29973 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CNGA1P29973 BCORP1-203ENST00000513194 5093 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNGA1P29973 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNGA1P29973 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNGA1P29973 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC104454.1-201ENST00000421341 1401 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNGA1P29973 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.07□□□□□ -1.44
CNGA1P29973 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.07□□□□□ -1.44
CNGA1P29973 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.07□□□□□ -1.44
CNGA1P29973 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.07□□□□□ -1.44
CNGA1P29973 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 RNU1-146P-201ENST00000364015 165 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.07□□□□□ -1.44
CNGA1P29973 MIR217-201ENST00000384817 110 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 MIR600-201ENST00000385007 98 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CNGA1P29973 SNORD65.1-201ENST00000390889 71 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.07□□□□□ -1.44
CNGA1P29973 PAICSP7-201ENST00000419829 962 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 DPRXP1-201ENST00000426312 460 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.07□□□□□ -1.44
CNGA1P29973 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.07□□□□□ -1.44
CNGA1P29973 AL008629.1-201ENST00000438615 184 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 SETD6P1-201ENST00000444575 317 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 GAPDHP25-201ENST00000447061 1001 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 RPL10P17-201ENST00000453852 316 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 Z92846.1-201ENST00000456203 268 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 RPS29P33-201ENST00000456717 146 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.07□□□□□ -1.44
CNGA1P29973 AC092324.1-201ENST00000468671 324 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 VPS26AP1-201ENST00000483197 979 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC6.07□□□□□ -1.44
CNGA1P29973 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 TCP11X3P-202ENST00000514289 1254 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 C1GALT1P3-201ENST00000522049 819 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.07□□□□□ -1.44
CNGA1P29973 AL442163.2-201ENST00000553912 710 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 SETP1-201ENST00000556014 845 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.07□□□□□ -1.44
CNGA1P29973 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.07□□□□□ -1.44
CNGA1P29973 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.07□□□□□ -1.44
CNGA1P29973 AC011447.4-201ENST00000587562 111 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.07□□□□□ -1.44
CNGA1P29973 AC124856.1-201ENST00000600819 896 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 AL355816.1-201ENST00000607951 118 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 AC097478.2-201ENST00000610572 514 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.07□□□□□ -1.44
CNGA1P29973 AC022509.4-201ENST00000621404 572 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.07□□□□□ -1.44
CNGA1P29973 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.07□□□□□ -1.44
CNGA1P29973 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CNGA1P29973 OR2L1P-202ENST00000641567 1023 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
CNGA1P29973 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CNGA1P29973 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.07□□□□□ -1.44
CNGA1P29973 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 AC027228.2-201ENST00000567141 2154 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 AC134882.1-201ENST00000603738 1676 ntBASIC6.07□□□□□ -1.44
CNGA1P29973 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CNGA1P29973 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
CNGA1P29973 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNGA1P29973 INTS6P1-201ENST00000504674 2530 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CNGA1P29973 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNGA1P29973 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.06□□□□□ -1.44
CNGA1P29973 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNGA1P29973 AL353743.4-201ENST00000422653 1547 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 RNU6-839P-201ENST00000363347 108 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 Y_RNA.192-201ENST00000363977 102 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 RAB28P1-201ENST00000411517 641 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.06□□□□□ -1.44
CNGA1P29973 NPM1P40-201ENST00000412758 733 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 MTND4P22-201ENST00000413116 1169 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.06□□□□□ -1.44
CNGA1P29973 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC099336.2-201ENST00000422457 254 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 GTF2IP23-201ENST00000423746 351 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 RIMKLBP2-201ENST00000424737 654 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.06□□□□□ -1.44
CNGA1P29973 USP9YP11-201ENST00000427537 717 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 NPM1P24-201ENST00000428039 894 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 SETP8-201ENST00000435341 628 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 RPL12P18-201ENST00000437175 325 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.06□□□□□ -1.44
CNGA1P29973 USP9YP22-201ENST00000438971 294 ntBASIC6.06□□□□□ -1.44
CNGA1P29973 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.06□□□□□ -1.44
CNGA1P29973 RPL23AP76-201ENST00000441860 458 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms