Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 HMGB2P1-201ENST00000591146 634 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AC069304.3-201ENST00000603938 1084 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 U3.53-201ENST00000628922 216 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 ATE1-AS1-202ENST00000636460 506 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 ZNF137P-201ENST00000456718 1920 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC090229.1-201ENST00000590983 1609 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC022893.2-201ENST00000564832 3296 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 RNU1-87P-201ENST00000363727 170 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 ATP5F1P2-201ENST00000398143 760 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 HSPD1P16-201ENST00000402302 394 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AP000357.1-201ENST00000409926 1165 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AL935212.3-201ENST00000450729 284 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 RPL23AP23-201ENST00000452590 471 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 ISCUP1-201ENST00000454451 448 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 RPL23AP37-201ENST00000479658 549 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC007686.1-201ENST00000488511 463 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 IGLV2-34-201ENST00000490007 283 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 CIR1P1-201ENST00000524055 1133 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC087283.1-201ENST00000604029 1074 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC010680.3-201ENST00000604215 520 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC079610.2-201ENST00000604818 690 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC011374.2-201ENST00000607135 526 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC006946.3-201ENST00000609791 756 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 MIR1264-201ENST00000616374 69 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AL645927.2-201ENST00000618350 349 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AC067852.7-201ENST00000623270 535 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 SAGE2P-201ENST00000420011 2126 ntBASIC4.66□□□□□ -1.66
HLA-DPA1P20036 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DPA1P20036 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
HLA-DPA1P20036 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DPA1P20036 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.65□□□□□ -1.66
HLA-DPA1P20036 AL137100.1-201ENST00000556703 1620 ntBASIC4.65□□□□□ -1.66
HLA-DPA1P20036 AC010928.1-201ENST00000592477 1447 ntBASIC4.65□□□□□ -1.66
HLA-DPA1P20036 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DPA1P20036 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HLA-DPA1P20036 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 SDHCP2-201ENST00000398565 501 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 MIR1303-201ENST00000408625 86 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 VTA1P1-201ENST00000414044 866 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 RWDD4P2-201ENST00000426392 563 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 FAR1P1-201ENST00000427163 934 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AC069540.1-201ENST00000446320 988 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DPA1P20036 SCARNA10-201ENST00000459255 330 ntBASIC4.65□□□□□ -1.67
HLA-DPA1P20036 RPL23AP71-201ENST00000470966 469 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms