Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 AC084782.1-201ENST00000564401 2465 ntBASIC8.49□□□□□ -1.05
CD44P16070 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CD44P16070 TRIM51HP-202ENST00000530412 1823 ntBASIC8.49□□□□□ -1.05
CD44P16070 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CD44P16070 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
CD44P16070 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
CD44P16070 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
CD44P16070 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.49□□□□□ -1.05
CD44P16070 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 AC245060.6-201ENST00000624350 8420 ntBASIC8.49□□□□□ -1.05
CD44P16070 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.48□□□□□ -1.05
CD44P16070 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.48□□□□□ -1.05
CD44P16070 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.48□□□□□ -1.05
CD44P16070 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 AL023806.3-201ENST00000638502 2704 ntBASIC8.48□□□□□ -1.05
CD44P16070 NXPH1-205ENST00000602349 1953 ntBASIC8.48□□□□□ -1.05
CD44P16070 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 OR2A20P-201ENST00000479887 2913 ntBASIC8.48□□□□□ -1.05
CD44P16070 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8.48□□□□□ -1.05
CD44P16070 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.48□□□□□ -1.05
CD44P16070 Y_RNA.71-201ENST00000362892 104 ntBASIC8.48□□□□□ -1.05
CD44P16070 RNU4-59P-201ENST00000364447 116 ntBASIC8.48□□□□□ -1.05
CD44P16070 RNU6-708P-201ENST00000384217 107 ntBASIC8.48□□□□□ -1.05
CD44P16070 Y_RNA.458-201ENST00000384240 102 ntBASIC8.48□□□□□ -1.05
CD44P16070 RNU6-1151P-201ENST00000384684 107 ntBASIC8.48□□□□□ -1.05
CD44P16070 MIR517A-201ENST00000385001 87 ntBASIC8.48□□□□□ -1.05
CD44P16070 RNU6-550P-201ENST00000391057 101 ntBASIC8.48□□□□□ -1.05
CD44P16070 AL590762.1-201ENST00000391782 432 ntBASIC8.48□□□□□ -1.05
CD44P16070 RN7SKP235-201ENST00000410662 305 ntBASIC8.48□□□□□ -1.05
CD44P16070 RNU6-272P-201ENST00000411028 104 ntBASIC8.48□□□□□ -1.05
CD44P16070 RPL21P109-201ENST00000422213 475 ntBASIC8.48□□□□□ -1.05
CD44P16070 AL590399.2-201ENST00000427536 309 ntBASIC8.48□□□□□ -1.05
CD44P16070 PSMA2P3-201ENST00000429685 675 ntBASIC8.48□□□□□ -1.05
CD44P16070 AC091390.2-201ENST00000432573 374 ntBASIC8.48□□□□□ -1.05
CD44P16070 TPT1P13-201ENST00000449760 499 ntBASIC8.48□□□□□ -1.05
CD44P16070 AC096754.1-201ENST00000508904 818 ntBASIC8.48□□□□□ -1.05
CD44P16070 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC8.48□□□□□ -1.05
CD44P16070 GAPDHP31-201ENST00000509325 1014 ntBASIC8.48□□□□□ -1.05
CD44P16070 TRAPPC2P7-201ENST00000509650 231 ntBASIC8.48□□□□□ -1.05
CD44P16070 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC8.48□□□□□ -1.05
CD44P16070 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC8.48□□□□□ -1.05
CD44P16070 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC8.48□□□□□ -1.05
CD44P16070 SULT1C2P1-202ENST00000562418 459 ntBASIC8.48□□□□□ -1.05
CD44P16070 FAM60BP-201ENST00000578364 658 ntBASIC8.48□□□□□ -1.05
CD44P16070 AC024619.4-201ENST00000580924 316 ntBASIC8.48□□□□□ -1.05
CD44P16070 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.48□□□□□ -1.05
CD44P16070 AC093227.2-201ENST00000589357 285 ntBASIC8.48□□□□□ -1.05
CD44P16070 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC8.48□□□□□ -1.05
CD44P16070 MIR1244-1-201ENST00000612829 85 ntBASIC8.48□□□□□ -1.05
CD44P16070 AL118522.2-201ENST00000616045 615 ntBASIC8.48□□□□□ -1.05
CD44P16070 AC025162.2-201ENST00000619602 560 ntBASIC8.48□□□□□ -1.05
CD44P16070 MIR1244-3-201ENST00000635744 85 ntBASIC8.48□□□□□ -1.05
CD44P16070 MIR1244-2-201ENST00000636449 85 ntBASIC8.48□□□□□ -1.05
CD44P16070 MIR1244-4-202ENST00000636813 85 ntBASIC8.48□□□□□ -1.05
CD44P16070 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 AC087045.3-201ENST00000623046 2468 ntBASIC8.48□□□□□ -1.05
CD44P16070 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC8.48□□□□□ -1.05
CD44P16070 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CD44P16070 LINC02555-201ENST00000563933 1951 ntBASIC8.48□□□□□ -1.05
CD44P16070 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.48□□□□□ -1.05
CD44P16070 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CD44P16070 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.47□□□□□ -1.05
CD44P16070 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC8.47□□□□□ -1.05
CD44P16070 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.47□□□□□ -1.05
CD44P16070 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC8.47□□□□□ -1.05
CD44P16070 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.47□□□□□ -1.05
CD44P16070 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
CD44P16070 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CD44P16070 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 AC090643.1-201ENST00000623600 3100 ntBASIC8.47□□□□□ -1.05
CD44P16070 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 RNA5SP463-201ENST00000363030 120 ntBASIC8.47□□□□□ -1.05
CD44P16070 RNU6-61P-201ENST00000365528 109 ntBASIC8.47□□□□□ -1.05
CD44P16070 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC8.47□□□□□ -1.05
CD44P16070 AL022722.2-201ENST00000402519 180 ntBASIC8.47□□□□□ -1.05
CD44P16070 RNU5E-9P-201ENST00000411164 104 ntBASIC8.47□□□□□ -1.05
CD44P16070 AC004986.1-201ENST00000414855 607 ntBASIC8.47□□□□□ -1.05
CD44P16070 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC8.47□□□□□ -1.05
CD44P16070 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms