Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 KARSP2-201ENST00000415696 1639 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 HSPA8P18-201ENST00000439846 1928 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 SAMMSON-210ENST00000641260 1308 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 AC022034.1-201ENST00000512867 2156 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 RNA5SP140-201ENST00000364524 92 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 SNORA51.2-201ENST00000364595 132 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 SNORA69-201ENST00000383895 132 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 SNORA20.2-201ENST00000383922 131 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 SNORA51.6-201ENST00000384151 125 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PDGFAP04085 ARF4P3-201ENST00000397387 509 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFAP04085 AL354751.2-201ENST00000415471 210 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFAP04085 AC091390.2-201ENST00000432573 374 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 YWHAZP8-201ENST00000436935 731 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 PMS2P9-201ENST00000441237 515 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 CBWD4P-201ENST00000445695 655 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 AC234771.3-201ENST00000454984 622 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 AC021660.1-201ENST00000465006 554 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 RPS27P20-201ENST00000492051 246 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 AC093278.1-201ENST00000494700 600 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 AC112484.3-201ENST00000505910 329 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 HMGN1P16-201ENST00000508308 283 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFAP04085 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 CYCSP28-201ENST00000534284 321 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFAP04085 AC140063.1-201ENST00000541343 259 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 AC123904.2-201ENST00000548059 300 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFAP04085 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.3□□□□□ -1.4
PDGFAP04085 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.3□□□□□ -1.4
PDGFAP04085 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFAP04085 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFAP04085 AP001429.1-201ENST00000602568 530 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFAP04085 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 MIR6721-201ENST00000617181 87 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.3□□□□□ -1.4
PDGFAP04085 AL033543.1-201ENST00000623440 13454 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFAP04085 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 NUP58P1-201ENST00000502546 1738 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFAP04085 MAPK10-287ENST00000641217 3037 ntBASIC6.3□□□□□ -1.4
PDGFAP04085 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFAP04085 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFAP04085 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFAP04085 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PDGFAP04085 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms