Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC007546.2-201ENST00000623996 360 ntBASIC4.77□□□□□ -1.65
VTNP04004 TMEM30CP-203ENST00000637814 1035 ntBASIC4.77□□□□□ -1.65
VTNP04004 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTNP04004 AL133268.1-201ENST00000405676 1401 ntBASIC4.77□□□□□ -1.65
VTNP04004 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTNP04004 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTNP04004 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VTNP04004 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.76□□□□□ -1.65
VTNP04004 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.76□□□□□ -1.65
VTNP04004 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
VTNP04004 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.76□□□□□ -1.65
VTNP04004 RNU1-13P-201ENST00000384499 162 ntBASIC4.76□□□□□ -1.65
VTNP04004 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VTNP04004 SNORD65-201ENST00000391079 73 ntBASIC4.76□□□□□ -1.65
VTNP04004 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 AL022722.2-201ENST00000402519 180 ntBASIC4.76□□□□□ -1.65
VTNP04004 RN7SKP235-201ENST00000410662 305 ntBASIC4.76□□□□□ -1.65
VTNP04004 EIF4A1P1-201ENST00000420241 934 ntBASIC4.76□□□□□ -1.65
VTNP04004 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.76□□□□□ -1.65
VTNP04004 AC073464.3-201ENST00000422564 712 ntBASIC4.76□□□□□ -1.65
VTNP04004 AC093084.1-201ENST00000424233 687 ntBASIC4.76□□□□□ -1.65
VTNP04004 AL157831.1-201ENST00000426134 473 ntBASIC4.76□□□□□ -1.65
VTNP04004 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.76□□□□□ -1.65
VTNP04004 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.76□□□□□ -1.65
VTNP04004 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.76□□□□□ -1.65
VTNP04004 VN1R32P-201ENST00000452234 905 ntBASIC4.76□□□□□ -1.65
VTNP04004 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.76□□□□□ -1.65
VTNP04004 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.76□□□□□ -1.65
VTNP04004 EIF2S2P4-201ENST00000461070 984 ntBASIC4.76□□□□□ -1.65
VTNP04004 RPS7P7-201ENST00000463499 571 ntBASIC4.76□□□□□ -1.65
VTNP04004 RPL7AP28-201ENST00000464513 571 ntBASIC4.76□□□□□ -1.65
VTNP04004 RPL7P22-201ENST00000466005 733 ntBASIC4.76□□□□□ -1.65
VTNP04004 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.76□□□□□ -1.65
VTNP04004 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.76□□□□□ -1.65
VTNP04004 AC010374.1-201ENST00000503762 1237 ntBASIC4.76□□□□□ -1.65
VTNP04004 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.76□□□□□ -1.65
VTNP04004 AC006518.1-201ENST00000541449 943 ntBASIC4.76□□□□□ -1.65
VTNP04004 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.76□□□□□ -1.65
VTNP04004 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.76□□□□□ -1.65
VTNP04004 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.76□□□□□ -1.65
VTNP04004 RN7SL435P-201ENST00000584418 282 ntBASIC4.76□□□□□ -1.65
VTNP04004 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.76□□□□□ -1.65
VTNP04004 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 AL671309.1-201ENST00000603750 544 ntBASIC4.76□□□□□ -1.65
VTNP04004 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.76□□□□□ -1.65
VTNP04004 AC007546.1-201ENST00000619452 559 ntBASIC4.76□□□□□ -1.65
VTNP04004 MIR8059-201ENST00000620427 81 ntBASIC4.76□□□□□ -1.65
VTNP04004 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.76□□□□□ -1.65
VTNP04004 AL391262.2-201ENST00000622466 494 ntBASIC4.76□□□□□ -1.65
VTNP04004 AP006248.3-201ENST00000623580 594 ntBASIC4.76□□□□□ -1.65
VTNP04004 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.76□□□□□ -1.65
VTNP04004 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.76□□□□□ -1.65
VTNP04004 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VTNP04004 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VTNP04004 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VTNP04004 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VTNP04004 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
VTNP04004 AC093849.1-201ENST00000563631 2209 ntBASIC4.75□□□□□ -1.65
VTNP04004 RNU1-14P-201ENST00000362759 152 ntBASIC4.75□□□□□ -1.65
VTNP04004 RNA5SP307-201ENST00000362863 116 ntBASIC4.75□□□□□ -1.65
VTNP04004 SNORD115-48-201ENST00000364764 76 ntBASIC4.75□□□□□ -1.65
VTNP04004 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VTNP04004 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VTNP04004 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VTNP04004 AC104297.1-201ENST00000393779 870 ntBASIC4.75□□□□□ -1.65
VTNP04004 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.75□□□□□ -1.65
VTNP04004 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.75□□□□□ -1.65
VTNP04004 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VTNP04004 VDAC1P6-201ENST00000430062 855 ntBASIC4.75□□□□□ -1.65
VTNP04004 Z99127.2-201ENST00000441426 334 ntBASIC4.75□□□□□ -1.65
VTNP04004 AL512326.1-201ENST00000443050 721 ntBASIC4.75□□□□□ -1.65
VTNP04004 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.75□□□□□ -1.65
VTNP04004 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.75□□□□□ -1.65
VTNP04004 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VTNP04004 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.75□□□□□ -1.65
VTNP04004 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.75□□□□□ -1.65
VTNP04004 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.75□□□□□ -1.65
VTNP04004 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.75□□□□□ -1.65
VTNP04004 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.75□□□□□ -1.65
VTNP04004 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VTNP04004 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.75□□□□□ -1.65
VTNP04004 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.75□□□□□ -1.65
VTNP04004 VN1R85P-201ENST00000601587 426 ntBASIC4.75□□□□□ -1.65
VTNP04004 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.75□□□□□ -1.65
VTNP04004 AL161729.3-201ENST00000603533 673 ntBASIC4.75□□□□□ -1.65
VTNP04004 BNIP3P19-201ENST00000605397 577 ntBASIC4.75□□□□□ -1.65
VTNP04004 AC090948.2-201ENST00000607363 564 ntBASIC4.75□□□□□ -1.65
VTNP04004 AC253576.2-201ENST00000618815 580 ntBASIC4.75□□□□□ -1.65
VTNP04004 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.75□□□□□ -1.65
VTNP04004 RNA5SP196-201ENST00000625967 102 ntBASIC4.75□□□□□ -1.65
VTNP04004 MIR492-201ENST00000638676 116 ntBASIC4.75□□□□□ -1.65
VTNP04004 OR5AC4P-202ENST00000642086 985 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms