Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC009268.1-201ENST00000561352 1203 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AC034105.4-201ENST00000568304 277 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AC091178.1-203ENST00000584586 279 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.78□□□□□ -1.64
CHRNA1P02708 AC006116.5-201ENST00000591936 559 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AC022916.3-201ENST00000592961 742 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AL161729.3-201ENST00000603533 673 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AC025175.1-201ENST00000606482 759 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 MIR6867-201ENST00000610636 67 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CHRNA1P02708 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.78□□□□□ -1.64
CHRNA1P02708 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.78□□□□□ -1.64
CHRNA1P02708 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CHRNA1P02708 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CHRNA1P02708 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.78□□□□□ -1.65
CHRNA1P02708 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CHRNA1P02708 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CHRNA1P02708 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
CHRNA1P02708 RNA5SP283-201ENST00000365604 119 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 RNU1-63P-201ENST00000383902 164 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CHRNA1P02708 SNORA48.7-201ENST00000391302 135 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 PPIAP31-201ENST00000405422 495 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 RN7SKP235-201ENST00000410662 305 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 RNU6-564P-201ENST00000410983 104 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 RPS20P1-201ENST00000434853 354 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 AL353597.2-202ENST00000434901 373 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 XKRYP6-201ENST00000440468 1116 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 XKRYP3-201ENST00000442113 1116 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 RN7SL812P-201ENST00000493791 279 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA1P02708 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA1P02708 RNA5SP446-201ENST00000515955 82 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 OR4V1P-201ENST00000525394 1140 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA1P02708 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA1P02708 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.77□□□□□ -1.65
CHRNA1P02708 COX6CP4-201ENST00000605798 228 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 AC019131.2-201ENST00000609071 870 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 AL021997.2-201ENST00000615674 271 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 AL445363.3-201ENST00000623080 671 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 AC112484.5-201ENST00000624189 228 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.77□□□□□ -1.65
CHRNA1P02708 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 HSPD1P11-201ENST00000508643 1702 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 MAPK10-349ENST00000641767 3661 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CHRNA1P02708 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.77□□□□□ -1.65
CHRNA1P02708 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA1P02708 ASNSP1-204ENST00000641977 1664 ntBASIC4.77□□□□□ -1.65
CHRNA1P02708 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CHRNA1P02708 AL122126.1-201ENST00000546905 1318 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA1P02708 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CHRNA1P02708 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA1P02708 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA1P02708 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA1P02708 AC011155.1-201ENST00000316512 456 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CHRNA1P02708 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.76□□□□□ -1.65
CHRNA1P02708 RNA5SP36-201ENST00000410197 133 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 RN7SKP199-201ENST00000410325 305 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 EIF4A1P1-201ENST00000420241 934 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 RPS26P47-201ENST00000427219 348 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.76□□□□□ -1.65
CHRNA1P02708 RPS26P4-201ENST00000431743 355 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 AL512326.1-201ENST00000443050 721 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA1P02708 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA1P02708 AC069277.2-201ENST00000454211 432 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA1P02708 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 RPS20P4-201ENST00000461659 355 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 RPL5P30-201ENST00000465511 891 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 RPL35AP15-201ENST00000468042 339 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA1P02708 RNA5SP519-201ENST00000516480 119 ntBASIC4.76□□□□□ -1.65
CHRNA1P02708 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA1P02708 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA1P02708 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms