Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PPIAP17-201ENST00000438507 471 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 ELOCP10-201ENST00000440624 327 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 RPL34P20-201ENST00000442771 351 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 CEACAMP7-201ENST00000444105 496 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 EEF1B2P5-201ENST00000444820 548 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 H2AFZP5-201ENST00000446960 382 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 EEF1A1P1-201ENST00000447052 739 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 NDUFS5P3-201ENST00000450668 321 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 CLIC4P1-201ENST00000453177 535 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC099560.2-201ENST00000457554 255 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC092691.2-201ENST00000461787 803 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC004815.1-201ENST00000484185 331 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC008953.1-201ENST00000497334 318 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC140172.1-201ENST00000502928 141 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 OR5M14P-201ENST00000506803 618 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 NARSP2-201ENST00000518524 679 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 HMGB1P46-201ENST00000520062 610 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 HMGN2P6-201ENST00000551091 273 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 MIR4691-201ENST00000583764 85 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC022726.1-201ENST00000587475 207 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC011447.4-201ENST00000587562 111 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 ELOCP34-201ENST00000604436 327 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC010200.2-201ENST00000605098 235 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AL355802.4-201ENST00000607635 548 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AP003392.5-201ENST00000607857 415 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC010928.1-201ENST00000592477 1447 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AL359715.4-201ENST00000606629 1436 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 RNU6-666P-201ENST00000363499 107 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AP002530.1-201ENST00000405705 684 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 NCSTNP1-201ENST00000406229 144 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 MIR1178-201ENST00000408396 91 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 MIR1911-201ENST00000410783 80 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 OR51B3P-201ENST00000412287 913 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 RANP4-201ENST00000413361 655 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC009302.1-201ENST00000417147 390 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 BMS1P13-201ENST00000417301 885 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC048351.1-201ENST00000420064 602 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 CYP4F29P-201ENST00000420685 446 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 RAD23BP1-201ENST00000421404 1227 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AL645608.4-201ENST00000423619 154 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 RBMY2QP-201ENST00000429799 1147 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 MTCO3P21-201ENST00000430791 643 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AL365396.1-201ENST00000430854 671 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 RSL24D1P8-201ENST00000434442 492 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 MTND2P21-201ENST00000436242 1042 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 TPRKBP1-201ENST00000456243 481 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 RPL23AP56-201ENST00000460778 453 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 RN7SL177P-201ENST00000476596 299 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 METTL15P1-201ENST00000481421 1045 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC091868.1-201ENST00000508746 304 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC108157.1-201ENST00000510511 539 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC026616.1-201ENST00000523157 525 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms